Heterobasidion irregulare: HETIRDRAFT_443514
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Entry
HETIRDRAFT_443514 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K14764
protein SHQ1
Organism
hir
Heterobasidion irregulare
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hir03009
]
HETIRDRAFT_443514
Ribosome biogenesis [BR:
hir03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
HETIRDRAFT_443514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
20675528
NCBI-ProteinID:
XP_009542369
JGI:
Hetan2_443514
UniProt:
W4KI47
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MITPRFRCEQTDASLILTVACPAVRAADVEIHVDNTLVSIHIAPYFLRLSLPAPVTEDDA
SSAAYDPAAGVLTLTLSKQTRGEHFPDLDLLPKLLAPRPVHPPTAPVIEVLASHDAQDAD
SDARPRRETHQTQDSDLAQRAQALSLDRPDLTHEQREILQAAANDWQLPQFVPAPTSFHT
ALQKPYGFLDAYTGYFRHVAESPNEANALGPDAETLSPADRRARRVAQEDAQWDEEHYMA
DYADPETIEELLEWEHPHLAVPVVAPFTEAENLAMLRLPRKEYLPTPAQTHSLYLTLATL
LFAYAYDARTTQHDPTPESAWTICVLTPAFAALDPPPYPPPSASASALLIPSLQPSPAPA
LITPADLLPSYRRALAFPLHRAFPLADRCRADAARLLARGPRTVLRCLLELRALLDAHDA
YYVYARIWLDDLCAWVAACASEAALHELGTALLALRIDKRALGWDIDALEAAVRATQAQP
RAPDSDDESDEHDEDPGDSSEESDSDSSEDSSEEGSDLDDARERPGGARAAEDTEVQKTV
PVSV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaccgcgcttcaggtgcgaacagacagacgcatcgctcatcctcaccgtcgcc
tgccccgccgtccgcgccgccgacgtcgagatccacgtcgacaacaccctcgtctccatc
cacatcgccccctacttcctccgcctctccctccccgcacccgtcacagaggacgacgcc
tcgtccgccgcgtacgaccccgccgccggcgtcctcaccctcaccctctccaagcagacc
cgcggcgagcacttccccgacctcgacctcctcccgaagctcctcgcaccgcgcccggtc
cacccgcccaccgcccccgtgatcgaggtcctcgcatcacacgacgcccaggatgccgat
agcgatgctcgtccgcgccgcgaaacgcatcagacgcaagattcagacctggcgcagcgc
gcgcaggcgctctcgctcgaccgcccagacctgacacacgaacagcgcgagatactccaa
gccgcagcaaacgactggcagctcccccaattcgtccccgcccccacctccttccacacc
gccctccaaaaaccatacggcttcctcgacgcctacactggctacttccgccatgtcgcc
gagtcccccaatgaagccaacgccctcggccccgacgcagagaccctctctcccgccgac
cgccgcgcgcgccgtgtcgcgcaggaggatgcgcagtgggacgaggagcactacatggcg
gactacgctgacccagagaccattgaggaacttctcgagtgggagcacccgcacctcgcc
gtacccgtcgtcgctcccttcactgaagccgagaacctcgccatgctccgcctcccgcgc
aaagaatacctccccacccccgcccagacccacagcctctacctcacgctcgccaccctc
ctcttcgcgtacgcctacgacgcccgcacgacgcagcacgatcccacccccgaaagcgcc
tggaccatctgcgtcctcacccccgccttcgccgccctcgaccccccgccctaccctcca
ccctccgcctccgcctctgccctcctcatcccgtccctccagccctcccccgcacccgcg
ctcatcacccccgccgacctcctcccctcctaccgccgcgccctcgccttcccgctccac
cgcgccttcccactcgccgaccgctgccgcgccgacgccgcgcgcctcctcgcccgcggc
ccgcgcaccgtcctccgctgcctcctcgagcttcgtgccctcctcgacgcgcacgacgcc
tactacgtctacgcgcgcatctggctcgacgacctctgcgcctgggtcgcagcctgcgcg
agcgaagccgccctgcacgagctcggcaccgccctcctcgcgctgcgcatcgacaagcgc
gccctcggctgggacatcgacgccctcgaggccgccgtccgcgccacccaggcccagccc
cgcgcgcccgacagtgacgacgagagcgacgagcacgacgaggacccgggcgattcaagc
gaagaatccgactcggattcgagcgaggactcgagcgaggagggctcagacttagacgac
gcgcgcgagcgtccgggcggcgcgcgtgctgcagaagacactgaggtgcaaaagacagtc
ccggtcagcgtgtga
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