Heterobasidion irregulare: HETIRDRAFT_460143
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Entry
HETIRDRAFT_460143 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
hir
Heterobasidion irregulare
Pathway
hir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HETIRDRAFT_460143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hir04121
]
HETIRDRAFT_460143
Enzymes [BR:
hir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HETIRDRAFT_460143
Ubiquitin system [BR:
hir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
HETIRDRAFT_460143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
20677046
NCBI-ProteinID:
XP_009549510
JGI:
Hetan2_460143
UniProt:
W4K0D2
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
MAPAWCILLESGEPSAAYAFLHGFSRAQAVYRVLDDEGVREEIGGRLAALIDDDAPQPDT
CRICSAPSEPDQPLFHPCKCSGTIRYIHQDCLTTWLAHSKKKTCDVCKYPYAFTKVYAQN
MPDHLPVILLLRRFAQQTFFAILLCLRAVLVAVVWLGALPYITICTWRVYFAMGSSTAWW
ISARPRPTTANESLFYTLTGQVHAPSVNATVAPDNSTVAAAGAIAAEPASPLARLIAHPR
VRALSKDIFTGQIIATLIVLAFIAVFLLREWISQNARPGVFEDPDLLAEELRAAQEERVP
LQVQVDAMRAGGAREEHEREAAPPPVEERPMRRLPLRARRRAPDADAPAPSGSEDTASNA
STATAPLGIASESKQAQLEADLMYLEQNLETWNPPDHRRLEEQNDGGKGKGRAMSEEEAE
RGEEDGERMMKWIPPSVASQGADARKASAATDILAPMPRPGPRRTVGPWLRRTAERQEME
RLGIADAFAPVPADATLSDAAQQAHFHDLGRQFLMRRRLLYERLRDESLAKGEEPLAFPE
ELVDVQLDDPAWRALAPPDTWPPLAEDAFVLPAEPPSHGAHTPHPHRARAPMYSRPRPVL
PPVSTDSAQRARTADALADGSFSFAPPPQFAARLAPLPSYPPLPYPIVASPPPPVSSASA
STTASPPLSSSLSPSPSTAATSGPPSPPRRPPMPSATLPAPTTPPTPSLAAGSYWGKEQV
QLASPSLATYRAPEEFQQPEAEDYFELGAAADAEDDLDTVAEGDGADDDEDSTAVLRREH
ARYFSEQGHVAERDGDVPTPVVPSDSEDDDDEEEVMEVVPRRAARRRAAWDPAQFDGPEQ
IDDDDEGEMDEVEGEGEGEGGRENGQALEPVDDMDINVEDDMDGALEGAIGMRGPIYTIA
QNAALMIFVLDTAIGLAVWLPFTLGKSTALLSLDPRRALQILHWPIRVMRVITDPITDSV
LFLIGTVVVPATVRIVGALLRIVFRPVMSWASKWLDNGLVDDYSLIAASLYGRLKAQPWG
VVSGYLGMSRVTEKTIETAPPRSSILDAILSSEHPVVRLAEPHFAVLGKEVRVSSENAKE
FWTRMALGDGNAEKAFAVALGYAVVGIMLALYLNVLTVGTVKSAGRAVRSAVRQQLLVIK
VAAFIVIELVVFPLGCGINLDLCTMWLFPEANLQSRLIFFHYAPLTAIFYHWVVGTMFMY
QFAILLAGCRTLMRPGAMWFIKDPSDQNFHPIRDILERPAMVQLRKLCVSALMYALVVAC
GVGTVGGIMRLSTTVLPLRWKPREPLSEVPIDLLFLHIVLPYTMRFFRPKKVLRKVSVGI
WKYLCAGLRLSSYMFGERRMEEEFNRSTWSWFPPKDIAMKHFDGSYRRVPASDNVVIPRD
MRATAEVDGAGVPVDDAARHLIETQNAEAEKAKRNFKDDYTVVYIPPHFRYRIVLFILAL
WVVGSVFLVAVFATPIQVGRNILRIFTNDEVHDGYSFLVGFYALWAGWVVGYAVERMDRR
RQRRGATGARAEWPLYFVKRSILWLAKISYMMLFIGVVVPILLALVVEMYIALPIRFMLN
PDLVPRIRIVDMWALGLVYAKIVLRVQGMRPNAPFAAGITNIKQHGWSNPHPVSATRLVI
APLVAGLVGMLVLPPLAALAVCRLSPIPLDYRVLFMHVYPSIFAAAGVARMAVTAATVLS
SWSQSIRDKEFLVEMRLRNYEHEKRKEGLAKEKEKEKGLEVVGL
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagcatggtgcatccttctcgagagcggcgagccctccgctgcatatgctttc
ttgcatggcttcagcagggcacaggccgtgtaccgcgtgctcgacgacgagggtgttcgc
gaagagattggaggccgtttggcagcgctcatcgacgacgacgcccctcaaccagacaca
tgtcgcatctgcagcgcgccctcggagccagaccagcccttgtttcacccatgtaagtgc
tccggcaccatccgctacatccatcaggactgcttgacgacatggctcgcgcacagcaag
aaaaagacctgcgacgtgtgcaaatacccctacgcgttcacaaaggtttacgcgcagaac
atgccagatcacctccccgtcatcctcctcctccgccgctttgcccagcagaccttcttc
gccatcctcctatgcctgcgcgcggtcctcgtcgcggtcgtctggctcggcgcgctgccg
tacatcaccatctgcacgtggcgagtctattttgcgatgggcagctcgaccgcgtggtgg
atcagcgcccgtccgcgcccgacgaccgccaatgaatccttgttctacaccctcaccggt
caggtacacgcgccttctgtgaacgcgaccgtcgcacccgacaactcgaccgtcgctgcc
gcaggcgccatcgccgccgagcccgcttctccgctcgcgcgcctcatcgcgcacccgcgt
gtgcgcgcgctgtccaaggacatcttcactggccagatcatcgcgacgctcatcgtgctc
gccttcatcgccgtcttcctcctccgcgagtggatctcgcagaacgcgcgccccggcgtg
ttcgaagacccggacctactcgccgaggagctccgcgccgcgcaggaagagcgcgtgccg
cttcaggtgcaggtcgatgcgatgcgtgcgggaggagcgcgggaggagcacgagcgcgag
gcggcgccgccgccggtagaggagaggccgatgcgccgcctgcctttacgcgcgcgaagg
cgtgcccccgatgctgatgctcccgcgccgagtgggagtgaggacactgcgagcaacgca
agtactgctacggctccgctgggcattgcttcagagagcaaacaagcacagttggaagcc
gacttgatgtatttggagcagaatttggagacgtggaacccgccggaccaccgtcggctg
gaggaacaaaacgacgggggaaagggaaagggacgggcaatgtcggaggaggaggcagaa
aggggggaggaggacggcgagcgtatgatgaagtggatcccgccgtcggtcgcgagccag
ggtgcggacgcccgcaaagcctctgcggcgacggacatcctggcgcctatgccgcggccg
ggcccgagacgcaccgtcgggccgtggctccgccggaccgctgagcgccaggaaatggag
cgcctgggcatcgctgacgcctttgcccccgtccccgccgacgccacgctcagcgacgcc
gcgcagcaggcgcacttccatgacttgggccgccagttccttatgcgccgccggctgctg
tacgagcgcctccgcgacgagagcctcgcgaagggcgaggaaccgctcgcgttccccgaa
gagcttgtcgacgtgcagctcgacgaccccgcatggcgcgcgctcgccccgcccgacacc
tggccaccgctggctgaagacgcatttgtattgcccgcggagcccccatcgcacggtgca
cacaccccgcacccgcatcgcgcgcgcgcgccgatgtacagccgcccacgccccgtgctc
ccgcccgtgtcgaccgactcagcgcagcgcgcacgcacggcggacgcgctcgcggacgga
tcgttctcattcgcacccccgccgcagttcgcagcccggcttgcgccgttgccatcgtac
ccgcctctgccatacccgatcgtcgcgtccccacccccgcctgtgtcgtccgcgtccgcg
tccactaccgcgtccccaccattgtcatcatcgctatcgccctcaccatcgacggcggca
acttcaggcccgccatccccgccgcgccgcccgccgatgccgagcgcgacactcccagcg
ccgacgacgccgcccacgccgtcgctcgcggcgggaagttattggggcaaggagcaggtg
cagctcgcatcgccgagcctcgcaacgtaccgtgcaccggaagagtttcagcagccggag
gcggaggactatttcgagcttggtgctgctgctgacgcagaggacgatttggatacggtc
gctgaaggggacggggcagacgacgacgaggattcgacggcggtgctgaggcgcgagcat
gcaagatattttagtgagcagggacatgtggctgagcgggacggggatgtgccgacgccg
gtggtgccgtcggactctgaggacgacgacgatgaggaggaggtgatggaggtagttccg
cggcgagcggctcggcggcgcgctgcgtgggacccggcgcagttcgatgggccggagcag
atagacgacgatgacgagggagagatggacgaggttgagggcgagggtgaaggtgagggt
ggccgggagaatgggcaggcgttggagcctgtggatgatatggatatcaacgtcgaggac
gacatggacggcgccttggaaggagccatcgggatgcgagggccgatctacaccatcgcg
cagaacgctgcgctcatgatattcgtgctcgacaccgccatcggcctggcggtgtggctc
ccgttcacgcttggcaagtcgacggcgctcctatctctcgatccccggcgcgcgctgcag
atcctccattggcccatccgtgtgatgcgcgtcatcacggatcctattacggactcggtt
ttgttcttgatagggacggtcgtcgttcctgctaccgttcgcatcgtcggtgcgcttctc
aggatcgttttccggccggtgatgtcctgggcgtccaagtggctcgacaacggcctcgtc
gacgattattctctcattgccgcatctctgtacggccgactgaaagcgcagccctggggc
gtcgtgtcgggataccttggcatgtcgcgcgttacagaaaaaacaatcgagaccgcgcct
ccgcggtcgtccatcctggatgccatcctttcatctgagcatcccgtcgttcggctcgcc
gagccacattttgccgttctgggcaaggaggtgagggtgtcctcggagaacgcgaaagag
ttctggacgcgcatggcgctaggcgacgggaatgcggagaaggcgttcgcggtggccctc
gggtatgcggtcgtcgggatcatgctcgcgctctatttgaatgtcctgaccgtcgggacc
gtcaagagcgcgggaagagccgtccggagcgcggtgcggcagcagctgcttgtgatcaag
gtggctgcctttatcgtcatcgagctggttgttttccctttgggatgcgggatcaacctc
gatttgtgtactatgtggctgttccccgaagccaaccttcaatcccggctgattttcttt
cactacgcgccgttgaccgccatcttctaccactgggtggttggcacgatgttcatgtat
caatttgccatcctcttagcagggtgccgcactctcatgcgccccggtgctatgtggttc
atcaaagacccgtctgaccagaatttccacccgatacgcgatattctggagcgtccggcg
atggtccagctgcgcaagctctgcgtcagtgcgctcatgtacgcgctggtggtagcgtgc
ggcgtcggcaccgtgggcggcatcatgcgactgagcaccaccgtcctgccccttcgttgg
aaacctcgcgagcctctttcggaggtcccgatcgaccttctattcctgcacatcgtcctc
ccgtacacgatgcgcttcttccggccgaagaaggtactgcgcaaggtctcagtcgggatc
tggaagtacctctgcgcagggctgcggctctcttcgtacatgttcggcgagcgcaggatg
gaggaagagttcaatcgctcgacgtggtcgtggttcccgccgaaagacatcgccatgaaa
cattttgacggcagctacaggagggtccccgccagcgacaatgtggtgattcctcgcgat
atgagggctactgccgaggtcgatggtgccggagtgcctgtggatgatgcggctcgacac
ctgatagagacccagaacgccgaggccgaaaaggctaagagaaacttcaaggacgactac
acggtcgtgtacatcccgccccacttccgctaccggatcgtgctgttcatccttgcgctt
tgggtggtcgggtccgtgttcctggtggctgtgttcgcgacgccgatccaggtcggccgg
aacatccttcggatcttcactaacgatgaggtgcacgacggctactctttcctcgtcggg
ttctacgcgctgtgggcaggctgggtcgtcgggtacgccgtcgagcgcatggacagacgc
cgtcagcgacgcggcgcgaccggcgcacgcgccgagtggccgctctacttcgtcaagcgg
agcatcctctggctggccaagatctcgtacatgatgctcttcatcggcgtcgtcgtcccc
atcctcctcgcgctcgtcgtggagatgtacatcgcgctgccgatacggttcatgctgaac
cccgacctcgtcccccgcatccgcatcgtcgacatgtgggccctcggcctggtctacgcc
aaaattgtcctgcgcgtgcaggggatgcgcccgaacgcccccttcgcggctggcatcacc
aatatcaagcagcacgggtggtcgaacccgcacccggtctcggcgacgcgcctggtcatc
gcgccgctggtggccggcctcgtgggcatgctcgtgctgcccccgctcgcggccctcgcc
gtctgccgcctctccccgatcccgcttgattaccgagtactcttcatgcatgtgtatccg
agcatcttcgccgcggcgggcgtggcacggatggcggtcaccgccgcgacggtgctctcc
tcgtggtcgcagtcgatacgggacaaggagttcctcgtcgagatgcggttgcggaactac
gagcacgaaaaacggaaggaggggctggcgaaggagaaggagaaggagaaggggctggag
gtcgtcgggctgtga
DBGET
integrated database retrieval system