Halorubrum lacusprofundi: Hlac_0243
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Entry
Hlac_0243 CDS
T00856
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
hla
Halorubrum lacusprofundi
Pathway
hla02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hlac_0243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hla02000
]
Hlac_0243
Transporters [BR:
hla02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hlac_0243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_5
AAA_29
ATP-synt_ab
AAA
Motif
Other DBs
NCBI-ProteinID:
ACM55848
UniProt:
B9LRM5
LinkDB
All DBs
Position
1:260893..263604
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AA seq
903 aa
AA seq
DB search
MPPLLSLSDVRTQFSTERGQVKAVDGIDLEIREGETVGLVGESGSGKSVTALSTMGLVDD
PGEIVGGTVELTDARVADELRDRYDAAEFVDGDTIDLTAAPEEALRFVRGREISMIFQDP
MTSLNPSVTVGEQVAESLKLHQYGGRRKDSWFNAVREILPKISRDVDDEVREETIEVLEE
VGIPEPGARIDEYPHEFSGGMRQRVLIAIALACQPGLLVADEPTTALDVTIQAQILDLID
DLQADLGMSVLMITHDLGVVAETCDRVAVMYAGEIVEEGPVEEIFGNPSHPYTYTLLESL
PSEEKERLTPIEGNVPDLIDMPSGCHFAPRCPWATEECTSGEIPYLQHGAEDVDHRSKCI
MESFDKNEYGDDAVGPGRDRSIGEPLVEIDGLRKYYEQTDSVLDRVLGADDRSVKAVDGI
DFTINRGETLGLVGESGCGKSTAGRALLHLTKPTDGRVVFAGTDLTELDGSALREQRKNL
QMIFQDPLSSLDPRQTVGQTIREPLSIHDLPESDPSVATEAEVTVSGIARDRVGVTVDDE
IDAVVGSGSGVATAHVDVTVADGEVDVDVREHLGVEGTVERTDAGDVERVSVTVSAGDTD
RLRRRRRVRQLLEAVGLEVGQYDRYPHELSGGQRQRVGIARALAVDPEFIVADEPVSALD
VSVQAQILNLMEDLQDRFDLTYLFIAHDLSVVRHISDRVAVMYLGEIVEVAATDELFADP
QHPYTKALLSAIPAPDPTVDTDDRVILEGDVPSPIDPPSGCHFRTRCPSVIPPADLDIKQ
ETYREVMNYRQRVDRQAIDVETILEAADESPGQVAADGGTASAAPSGGDAIPPGAVEAVR
DVQFDQYPDGRAGEVVDRSLRLVIAGEWEEAADILEETFASVCEREEPTLPDGDHPAACH
LID
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctactttcgctctctgacgtccgtacccagttctcgacggaacggggacag
gtgaaggcggttgacggaatcgatctggagatccgcgaaggcgagaccgttggactcgtc
ggcgaatcgggctccgggaaaagcgtcacggcgctgtcgacgatggggctcgtcgacgac
cccggcgagatcgtcggcggaaccgtcgagctgacggacgcccgagttgcggacgagctc
cgcgaccggtacgacgccgctgaattcgtcgacggcgacacgatcgatctcacggccgcc
cccgaggaggcgcttcggttcgtccgcggccgggagataagcatgatcttccaagacccg
atgacgtcgctgaacccttcagtgacggtcggcgagcaggtcgcagagagtctcaaactc
catcagtacggcgggcgtcgcaaggactcgtggttcaacgcggtgcgcgagatcctcccg
aagatcagccgcgacgtggacgacgaagtccgcgaagagaccattgaggtgcttgaagag
gtcggcatcccggaaccgggcgcgcggatcgacgagtacccgcacgagttctccggcggg
atgcgccagcgggtgctcatcgcgatcgcgttagcctgtcagccggggctgctcgtggcc
gacgagccgacgaccgcgctggacgtgaccattcaggcgcagatcctcgacctgatagac
gacctgcaggccgacctggggatgtcggtgctgatgatcactcacgacctcggcgtcgtg
gccgagacgtgcgaccgcgtcgcggtgatgtacgccggcgagatcgtcgaagagggcccc
gtcgaggaaatcttcgggaacccgtcgcacccgtacacgtacacgctcctcgagtccctc
ccgagcgaggagaaagagcgcctcacgccgatcgaggggaacgtccccgacctcatcgat
atgccgtcggggtgtcacttcgcgccgcggtgcccgtgggcgaccgaggagtgtacgagc
ggcgagatcccgtacctccagcacggcgccgaggatgtcgaccatcggtcgaagtgcatc
atggagtcgttcgacaagaacgagtacggcgacgacgctgtcggccccgggcgcgaccgg
tcgatcggcgagcccctcgtcgagatcgacggactccggaagtactacgaacagacggac
agcgtgctcgaccgggttctcggtgccgacgaccgcagcgtgaaggcggtcgacgggatc
gacttcacgatcaaccgcggcgaaacgctgggactcgtcggcgaatccggttgcgggaag
tcgacggccgggcgagcgctgttacacctcaccaaaccgaccgacggccgggtggtgttc
gccgggaccgacctcacggaactcgacggatcggcgctgcgagagcagcggaagaacctc
cagatgatcttccaagacccgctctcctcgctcgatccgcgacagacggtcggccagacg
atccgcgagccgctgtcgatccacgacttgcccgagagcgacccgagcgtggcgaccgag
gccgaggtgaccgtctccgggatcgcccgcgacagggtcggcgtgacggtcgacgacgag
atcgacgccgtcgtcggctccgggagcggcgtggcgacggcccacgtcgacgtaacggtc
gcggacggcgaggttgacgtcgacgtgcgcgaacacctcggggtcgaggggacggtcgag
cgcactgacgccggcgacgtggaacgcgtctcggtgacggtctctgccggcgacaccgac
cggctcaggcggcggcgtcgcgtccgacaactgctggaggcagtcggtctcgaggtgggc
cagtacgaccggtacccccacgagctgtccggcggccagcgccagcgcgtcggcatcgct
cgggcactcgcggtcgatccggagttcatcgtcgccgacgagccggtgtcggcgctcgac
gtgagcgtgcaggcgcagatcctcaacctgatggaggatcttcaggaccggttcgacctg
acgtacctgttcatcgcgcacgatctctcggtggtgcgccacatcagcgaccgcgtcgcc
gtgatgtacctcggcgagatcgtcgaggtggcggcgaccgacgagctgttcgcggacccg
caacacccgtacacgaaggcgttgctctccgcgatccccgcgccggacccgacggtggac
accgacgatcgcgtcatcctcgaaggcgacgtgccgtcgccgatcgacccgccatcgggg
tgtcacttccggacccggtgtccgtcggtgatcccccccgccgatctcgacatcaaacag
gagacgtaccgtgaggtgatgaactaccgacagcgggtcgatcgacaggcgatcgacgtc
gagacgatcctcgaggcggccgacgaatcgcccggacaggtagcggccgacggcggcacc
gcgtccgctgccccgtccgggggtgacgcgattccgcccggtgcggtcgaggcggtccgc
gacgtccagttcgatcagtacccggacggacgcgccggcgaggtcgtcgatcgctccctc
agactggtgattgccggcgagtgggaggaggcggccgatatcctcgaggagacgttcgcc
agcgtctgcgagcgcgaggagcccacgctccccgacggcgaccatccggctgcgtgccac
ctgatcgactga
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