Halobiforma lacisalsi: CHINAEXTREME15485
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Entry
CHINAEXTREME15485 CDS
T04669
Name
(GenBank) histidine kinase
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
hlc
Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlc03000
]
CHINAEXTREME15485
Transcription factors [BR:
hlc03000
]
Prokaryotic type
Helix-turn-helix
Other families
CHINAEXTREME15485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
PAS_4
GAF_2
GAF
Sigma70_r4
Sigma70_r4_2
PAS_9
HTH_20
PAS
GAF_3
HTH_5
DASH_Duo1
Motif
Other DBs
NCBI-ProteinID:
APX00110
UniProt:
M0LFK2
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All DBs
Position
3182951..3184987
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AA seq
678 aa
AA seq
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MIVVITTASRGESRLRERLGGKANVVVQPVDPDLEENGDDHDPDLGSMPVPDGSSTGTGT
GTATVPDGLVIELRDPRPEVLEALLTRMDDEFGDGVPTIVSSWSGSEELAATAVRADADD
YVPIEGKDSADRILETVSSGLERSDPSVKFHRIIAEELPDEAFVISEDGTYLESKMSSDS
VALYTISPSELTGNHLTDAFPEEEAERLMACIERAIATEEIQTIEYDAPTVEGPRRFEGR
VVPVDERIDGKRAVVWLARDITERVERERQLRSQRAELETLNRINAVVRQVIETLVEAPT
REAIECDVCEQLVASELYSGSWIVGRTGEGSLSYRTGAGDAETYLERVQEIDIEHERPVE
RVGRTGEVEAVNHVLESNSLPDELEEAAREDEVHAAISVPIIYEDVTYGVLSVLASREDA
FSESEQAGFELLGETMGFAIMAVRNRQLLFADSVVELEFRIDGGDSLSFDLSEEYGCTCS
LEWAGTGTNGRTYQFVNIDGLGGETVLEEARNHESIEECRLIYDGNEQCTLELRLSESGV
RTLANHGATIRDVTVSDGVGTCLVEVPQNADVREIADALSLVYENTELVARREVDRPVRT
ASERRDRILDELTDRQLTTLRLAYYGGFFDWPRESTGEEIAEMMDVSPPTMHQHLRKGLK
TVLGEFFEEHGPAPDEGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttatcacgaccgcatcgcggggggagagtcgtctccgtgagcgactgggc
ggcaaggctaacgtcgtcgtccagccggtcgatccggatctcgaggaaaacggcgacgac
cacgatccggacctggggtcgatgccggtccccgacgggagttcgacggggacagggacg
gggaccgcgaccgtaccggacgggctggtgatcgaactccgcgacccccgaccggaggtc
ctcgaggcgctgctcacccgaatggacgacgagttcggcgacggggtaccgacgatcgtc
tcatcctggagtggcagcgaggaactcgcggcgaccgcggttcgggccgacgccgacgac
tacgtcccgatcgagggcaaggattccgccgaccgtatccttgagacggtctcgtccggg
ttggagcgctccgacccgagtgtgaagttccaccggattatcgccgaggagctcccggac
gaggcgttcgtcatcagcgaagacggaacgtacctcgagagcaagatgagttccgactcc
gtggcactgtatacgatatcgcccagcgagctgaccgggaaccacctcacggacgcgttt
cccgaagaagaggcggagcgtctcatggcgtgtatcgagcgggcgatagcgacggaagag
atccagacgatcgagtacgacgcgccgacggtcgaggggccgcgccggttcgaaggccgt
gtcgtgccggtcgacgaacggatcgacggcaaacgggccgtcgtctggctggctcgagac
atcaccgagcgggtcgagcgggaacggcagttacgttcccagcgggccgaactcgagacg
ctgaatcggatcaacgcggtcgtccgccaggtgatcgagacgctcgtcgaggcccccacc
cgcgaggccatcgagtgtgacgtctgcgaacagctggtcgcctcggagctgtactcgggg
tcgtggatcgtcggccggaccggcgagggctccctctcctaccggacgggtgcgggcgac
gcggagacgtacctcgagcgggtccaggagatcgacatcgagcacgagcggccggtcgaa
cgcgtcggccggacgggtgaggtcgaggcggtcaaccacgtgttagagagcaactccctg
ccagacgaactcgaggaggcggcccgggaggacgaggtacacgcagccatctccgtgccg
atcatctacgaggacgtcacctacggcgtgctctccgtcctcgcgagccgggaagacgcc
tttagcgagagcgagcaggccgggttcgaactcctcggagagacgatggggttcgcgatc
atggcggtccggaaccgccagctcctgtttgccgactccgtcgtcgaactcgagttccgt
atcgacggtggcgactcgctttcgttcgatctctccgaggagtacggctgtacctgctcg
ctcgagtgggccggtaccggtacaaacggccgcacctaccagttcgtgaacatcgacggc
ctcggcggggaaacggtcctcgaggaggcgcgaaaccacgagtcaatcgaggagtgccga
ctcatctacgacgggaacgaacagtgcaccctcgagttgcggctgtcggagtcgggcgtc
cggacgctcgcgaaccacggcgcgacgatcagggacgtcaccgtcagcgacggcgtcgga
acctgtctcgtcgaggttccgcagaacgcggacgtcagggagatcgccgacgcgctctcg
ctcgtttacgagaacacggaactcgtggcccgccgggaggtcgaccgacccgtcaggacc
gcctcggagcggcgggatcgcatcctcgacgaactgaccgaccgccagctcacgacgctc
aggctcgcatactacggcggcttcttcgactggccccgcgagagcaccggcgaggagatc
gccgaaatgatggacgtctcgccgccgacgatgcaccagcacctccggaaaggcctcaag
accgttctcggcgagttcttcgaggaacacggccccgcgccggacgagggcgagtga
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