Haliaeetus leucocephalus (bald eagle): 104833038
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Entry
104833038 CDS
T08630
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle04510
Focal adhesion
hle04512
ECM-receptor interaction
hle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104833038 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104833038 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104833038 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hle00535
]
104833038 (COL9A3)
Proteoglycans [BR:
hle00535
]
Extracellular matrix (ECM) proteoglycans
Others
104833038 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104833038
NCBI-ProteinID:
XP_010567839
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MAGFSALGLLFLCQLLATTPAQRVGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGPAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPFGLPGFPGPPGPPGPPGLPGSFPDGGGDLQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAG
DRGDIGFRGPPGIPGPPGKAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGMPG
QDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGVKGAKGEPGSPGEMGEAGPSG
EPGIPGEVGIPGERGLPGPRGATGPLGLQGPMGVPGVRGFQGPKGASGEPGLPGPTGIRG
ELGDRGPTGVPGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNG
TAGAPGIPGHPGPMGHQGEQGIPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGAMGSVGHPGPRGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGIDGPDGDQGLQGLPGVPGITKNGRDGAQGEPGLPGDPGTPGAIGAQGTPGICDT
SACMGAVGASISKKS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctctgctcttgggcttctcttcctatgtcagctattagccacaacccca
gctcagagagtaggaccacaaggcccccctggaccacgaggaccccctggaccatctggc
aaggatggcatcgatggagagccaggccctcctggtttgccaggcccaccagggccaaaa
ggtgcaccagggaagcctggagcagctggtgaagctgggttgcctggccttcctggagtg
gatggtttaacaggaactgatggcccacctggcccaaatgggcctccaggggaccgtggt
gcattaggacctgccgggccacctggaccagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggctcccaggtggaaatggatttcggggtcctcctggtcccttt
ggtctgccaggattcccagggcctcctggaccacccggacctcctggtcttccgggctcc
tttcctgatggcggtggggaccttcagtgcccagctctgtgcccaccgggtcctccaggt
cccccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggcgaaata
ggaaaagaaggagagaagggtaaccctggccctccaggtcctccaggaattcccggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggtccaatgggtccggctggt
gacagaggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggcgaccaaggaaacaaaggacctcaaggattcagggggcccaaaggtgatactggtaga
cctggaccaaaaggaaacccaggggctcgtggactcataggagaacctggcatgcctggc
caggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggactgcctggactgcctggaagagcaggtgtt
aaaggcgcgaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggtgaagttggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggaccgcttggtcttcaaggcccgatgggagtccctggtgtcagaggtttc
cagggtcccaaaggtgccagtggtgaacctggccttcctggtccgactggaattcgtgga
gagttaggtgacaggggtcctactggtgttcctggtcccaaaggtaaccagggcattgct
ggagcagatggcctcccaggtgacaaaggagaactgggtccctttggtccccccggccaa
aaaggagagccaggaaaaagaggagaacttggtccaaaaggtgtccaaggacctaatggg
acagcgggagcaccagggatcccaggacatccagggcccatgggccatcagggagagcaa
ggcattcctggcatcacgggaaaacctgggccacctggcaaagaggccagtgaacaacat
ataagagaactctgtggggaaatgataaatgatcaaattgcacagttagctgctaatctg
agaaagcccttgtctcctggaatgacgggtcgtcctggcccagctggtcccccaggtcct
cctggagctatgggaagtgttgggcatcctggtcctcgtggtccccctggatacagaggg
ccaacaggagaacttggtgatcctggtcccagaggtgacactggcgaaaagggagataaa
ggacctgttggtcaaggtatcgatgggcctgatggtgatcaaggacttcaaggactacct
ggtgtacctggaattactaaaaatggtcgtgatggtgctcagggtgaacctggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgtgacacg
tcggcttgcatgggagctgttggagcatcaatttccaaaaaatcataa
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