Halobacillus litoralis: HLI_02000
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Entry
HLI_02000 CDS
T05828
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hli
Halobacillus litoralis
Pathway
hli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HLI_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hli03400
]
HLI_02000
Enzymes [BR:
hli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HLI_02000
DNA repair and recombination proteins [BR:
hli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HLI_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
AAA_19
AAA_30
ATPase_2
PIF1
SLFN-g3_helicase
T2SSE
zinc-ribbons_6
ADDB_N
Flavi_DEAD
AAA_16
TrwB_AAD_bind
DUF6699
Cytochrome_B
zf-ISL3
zinc_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
QAS51058
UniProt:
A0A410M8N0
LinkDB
All DBs
Position
complement(383169..385580)
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AA seq
803 aa
AA seq
DB search
MTIANVIVDVPSQNTNRPFDYEIPEKYEGIVQPGVRVIVPFGPRKIMGYVISLAETSSFS
SVKKITDVLDVIPTLTEELLDLGMWLSKKTLSFYISCLQVMLPQVMKAKYRKELWKLSEE
PLASDLDSVFDGRAVIDFEDFEQSGVSYHVLRKHMDEGEVDVHYEVKSRETKKVTTMIEP
QLQPVELEEKLVDISSQAKKQRVILEYLIEHPEPISKKQLLEKLATTSASLKPLIERGVL
REYKQEVFRDPYGDREFERTQPFPLTSEQETAITPILSTIEENQHEVFLLHGVTGSGKTE
IYLQSIQQVIDKGEEAIMLVPEIALTPQMVERFKGRFGSKVAVLHSALSAGEKYDEWRKI
QRKEVQVVVGARSAIFAPFTNIGLIIIDEEHETSYKQEDRTRYHARDVAVERARTHKCPV
VLGSATPSLESYARAVKGNYHLLTMGKRMNEAVMPEVELIDMRDELHEGNRSMFSRTLKE
KIEARIARGEQVVLFLNRRGYSTFVMCRDCGHVSECPHCDIALTYHKRQNRLKCHYCSHE
EPMPTECPECESKTIRYFGTGTQKVEEALQELIPEARTIRMDVDTTRRKGAHERLLNQFG
EGKADILLGTQMIAKGLDFGNVTLVGVLAADALLNLPDFRASEKTFQLLTQVSGRAGRHE
KPGEVVVQTYTPEHYSIELASQYDYEQFFNEEMKLRKAFRYPPYFFLTLFTVSHPNQLKV
QEVTQKITMFMEQKLSDQAYVLGPTPSALTRINNRYRYQCMVKYKKEPEQRKFVERILHY
YEDEMKQENGLQITVDFQPYQLM
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtgacaatcgcaaatgtgattgtggacgtcccttcccaaaacacgaaccgtccgtttgat
tatgaaataccagagaaatatgagggcattgtccagcccggagtcagggtcatcgttcct
tttggtccaagaaaaatcatgggctatgtaatttctttagccgaaaccagttctttctct
tcagtaaagaagatcacagatgtattagatgtgattccgacactgacagaagaattactc
gatttggggatgtggttgtctaaaaagaccctcagcttttacatctcctgcctgcaagtg
atgcttccccaagttatgaaagctaagtaccgtaaagaactttggaaattatcagaggag
ccgttagcttctgacttggacagtgtattcgatggtcgggctgttattgattttgaggac
tttgaacaatcaggggtcagttatcatgtgttaaggaaacacatggatgaaggtgaagta
gatgtccattacgaagtgaagagtcgtgaaaccaaaaaggtcactactatgatcgagcct
caactgcagccagttgaactggaagagaaactcgtcgacatctcctcacaggctaagaaa
cagcgggtgatacttgaatatttgatcgaacacccggaacccatatccaaaaagcaacta
ttggaaaaacttgcgacgacgtcggcttctttaaaacctcttatcgaacggggggttctc
cgcgagtataagcaggaagttttccgggatccatatggggacagggaattcgagcggaca
cagccttttcccttaacctccgaacaagaaaccgccatcactccgattttaagtacgata
gaagaaaaccagcatgaagtgtttttattacatggagtaacagggagtggaaagactgaa
atttatctccaatcgattcaacaggtgattgataaaggagaagaagcgattatgctggtt
ccggagattgctttgactcctcagatggttgaacgtttcaaaggtagattcgggtcgaaa
gtggctgtattgcacagcgcgttgtctgcaggtgaaaaatatgatgaatggcgaaaaatc
cagcgtaaagaagtgcaggtcgtcgtaggtgcccgatccgcgattttcgctccttttacc
aatatcggtctcatcattattgacgaagagcatgagacgagctataaacaggaagaccgg
acccggtaccacgcaagggatgtcgctgtcgaacgcgccaggactcacaagtgtcccgtc
gtcctgggaagcgcgacaccatcattagaaagttacgcccgggcagtgaaaggtaactac
catttacttacaatgggtaaacggatgaacgaagcggtcatgccggaagtcgagctgatc
gatatgcgtgatgaactgcacgaggggaaccgttccatgttctcgcggactctgaaagaa
aaaattgaagcacgaatcgcccgcggggagcaagtcgtcttatttttgaaccgccgtggt
tattcaacgttcgttatgtgcagggattgcggccatgtcagtgaatgtccgcattgtgat
attgctttgacctaccataagcgtcaaaatcgtttgaaatgtcactattgttcccatgaa
gagccaatgccgacagaatgccccgaatgcgaaagcaaaacgatccgttactttggtacg
ggcacccagaaggtggaggaagcgttacaagaacttatcccggaagcaaggacgatccgt
atggatgttgatacgactcgaagaaaaggagctcatgaacgtttgcttaaccaattcggt
gaagggaaggcagatatcctcctcggtacgcaaatgatcgccaaaggtcttgatttcggt
aatgtgactcttgtgggagtgctggcagctgatgcgttacttaatttgcctgattttcgt
gcttcggaaaaaacctttcaattgcttacacaagtgagtggaagagctggaaggcatgaa
aagccaggggaagtcgttgtacagacatatacaccggaacattacagtatcgaactggcc
agccagtatgattatgaacaattcttcaatgaagaaatgaagttgagaaaggcgtttcgt
taccctccttatttctttttgacattgttcactgtctcccatccgaatcaattgaaagtg
caggaagtgacacagaagatcacgatgttcatggaacagaaattgtcagaccaggcttat
gttcttggcccgacaccttctgccttgacccgtatcaacaatagatatcgctaccaatgc
atggtaaaatacaagaaagaaccagagcagcgaaaattcgttgaacggatattgcattat
tatgaagatgaaatgaagcaagaaaatggattacaaattacggttgacttccaaccgtat
cagttgatgtaa
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