Hyphomicrobium sp. MC1: HYPMC_0339
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Entry
HYPMC_0339 CDS
T01557
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00470
D-Amino acid metabolism
hmc00550
Peptidoglycan biosynthesis
hmc01100
Metabolic pathways
hmc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYPMC_0339 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYPMC_0339 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HYPMC_0339 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_0339 (ddlB)
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HYPMC_0339 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Precursor biosynthesis
Amino acid ligase
HYPMC_0339 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
Motif
Other DBs
NCBI-ProteinID:
CCB63573
UniProt:
F8J8J9
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All DBs
Position
330618..331571
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AA seq
317 aa
AA seq
DB search
MNTLGPVPKRTRNHVAVLKGGLSAEREVSLNSGAAVGEALLQSGYAVTEIDVDRDLGSRL
QELKPDVCFNALHGKFGEDGCVQGVLELLGIPYTHSGVLASALAMHKERAKDIMKLAGVA
VADATLVTRGEALEKHVMAPPYVVKPVTEGSSVGVVIVPPGAERPPNSIAAGGPLDQIVM
VERYVAGRELTCAVIGNFVTDIIEIVPLRGLAFYDYEAKYAPGGSKHELPAKLLPDVYQT
LRSLTLRAHQALGCRGVSRADFRYDDTAGGTGELICLEVNTQPGMTGTSLVPELAGYAGW
SFSDLVRWMVEDASCNR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactcggcccggttccgaagcgtacgcgcaatcacgtcgctgttctgaagggt
ggcctttcggctgagcgcgaggtgagcctcaattccggtgcggcggttggggaggcgctg
ctgcagagcggctacgcggtgaccgagatcgacgtcgatcgcgatcttggaagccggttg
caggaactgaagcccgacgtctgcttcaatgcgctgcacggcaagttcggggaggacggc
tgcgtgcagggcgtgctggagctgctcggcattccttacacgcactccggcgttctggcg
tcggcgctcgccatgcacaaggagcgggcgaaggacatcatgaagctcgcgggcgttgcc
gttgctgatgccactctggtgacgcgtggcgaggcgctggagaagcatgtcatggcgccc
ccttatgtggtgaagccggtgacggaggggtcgagcgtcggcgtcgtaatcgtgccgccc
ggcgccgagcggccgccgaactcgatcgctgcgggtggtccgctcgatcagatcgtgatg
gtcgagcgttatgtggcagggcgcgagttgacctgcgccgtcattggcaactttgtgacg
gatatcattgaaattgtgccgcttcgtggcctcgcgttctacgattatgaggccaaatac
gcacccggcggctcgaagcacgaactgcccgcgaaacttttaccagatgtttaccagaca
ctccgttccttaacgttaagggcgcatcaggctttgggctgtcgcggcgtatcgcgggcc
gactttcgctacgacgacacggccggtggaacgggcgagctgatctgcctcgaagtcaac
actcagccgggcatgacggggacatccctggtgcccgagctggcgggttatgccgggtgg
tcgttcagtgacctagtccggtggatggtcgaggacgcgagttgcaacaggtag
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