Hyphomicrobium sp. MC1: HYPMC_1296
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Entry
HYPMC_1296 CDS
T01557
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hmc
Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmc03400
]
HYPMC_1296
Enzymes [BR:
hmc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HYPMC_1296
DNA repair and recombination proteins [BR:
hmc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HYPMC_1296
Prokaryotic type
HYPMC_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CCB64527
UniProt:
F8J515
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All DBs
Position
1221848..1223311
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AA seq
487 aa
AA seq
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MLLMTESATIVWFRNDLRLCDHPALTAAVKRGGPVIALFVLDDAAAGCWKLGGASRWWLA
KSLEALSHDIAQRGARLILRRGDTESILKRLVDESGATAVYVTRGYEPWAKGLEEKLHKS
FGGSGVVFKRFGGRLLREPEDLRTSSGAAYQVFTPFWRVFRKEFSAPKALAAPRHLGPVP
DAIASDDISDWKLAPTKPDWSGGLAEAWRPGERGAQLRLKNFVSEGLSNYDDGRDRLNAE
GTSRLSPHLAFGEISPAACWRAAAEASHQTHSSDGAVETFLKELAWREFSYALLFQFPQM
PDEPLRDEFAAFPWAKSSANLKAWQRGLTGYPVVDAGMRELWATGYMHNRARMIAASFLT
KHLLLPWTSGEAWFWDTLVDADLANNAANWQWVAGCGADAAPYFRIFNPVLQGEKFDPDG
DYVRRWVPELQRLPSADIHKPWAADATTLKRAGVAIGKNYPFPIVDHKEARARALTAYDR
VKSSKRG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgatgaccgagagcgcgacgatcgtctggtttcgtaatgatctccggctttgc
gatcaccccgcgttgaccgctgcggtaaagcggggtggaccggtcattgcgctgttcgtt
ctcgatgatgcggctgcggggtgttggaagctgggcggtgcatcgcggtggtggctggcg
aaaagtctggaagcgttgagccacgacattgcgcagcgtggcgcacgcctgattttgcgt
cgaggcgatacggaaagtattttgaaacgtctcgtcgatgagagcggtgcaacggcagtt
tacgtcactcgcggttatgagccctgggccaaggggttggaggaaaagctccataagtcg
ttcggtggatcgggtgtggtcttcaaacgcttcggcggtcgtttgctgagggaaccggaa
gatttgcgcacatcgtccggcgcagcctatcaggtcttcacgccgttctggcgcgtcttc
aggaaagagttttcagcgccaaaagcactggcggcgccacgtcatcttggcccggtgccg
gacgcgattgcatcggacgatatttccgactggaagctcgcgccgacgaaaccggattgg
tcgggaggtttggctgaggcgtggcggcccggcgagcgtggcgcgcagttgcgtcttaaa
aatttcgtcagcgagggtctttcaaattacgatgacggacgcgatcggcttaatgcggag
gggacgtcgcgactttcgccgcatcttgcattcggtgaaatttctccggcggcgtgctgg
cgcgcagcagcggaggcatcgcatcaaactcacagcagcgatggcgccgtcgaaacattt
ctcaaagagcttgcatggcgcgagttcagttacgcgctgctctttcaatttccgcagatg
ccggatgaaccattgcgcgatgagtttgcggcgtttccctgggcgaagtcgtcggctaac
ctcaaggcgtggcagcgcggtttaacgggatatcccgtcgtcgatgccggaatgcgcgaa
ctctgggctacgggatatatgcacaaccgggcgcgcatgattgcggcgtcttttttgacc
aagcacctgcttctaccgtggacatcaggcgaggcgtggttctgggacacgctcgtcgac
gccgatctcgcaaacaacgctgcgaattggcagtgggttgccggttgcggtgcagatgcg
gcgccttacttccgtattttcaatcctgtcttgcagggcgagaaattcgatcctgatggc
gactatgttcgccgctgggttccggagcttcaacgcttaccctctgccgatattcacaag
ccatgggcggccgatgcgacgacgctgaaacgcgcgggagtcgctatcgggaaaaattat
ccgtttccgatcgtggaccataaagaggcgcgcgctcgcgcgctgacggcgtatgaccgc
gtgaaatcgagcaagcgaggttga
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