Hyphomicrobium sp. MC1: HYPMC_2039
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Entry
HYPMC_2039 CDS
T01557
Name
(GenBank) putative alanine racemase (alr-like)
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00470
D-Amino acid metabolism
hmc01100
Metabolic pathways
hmc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYPMC_2039
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HYPMC_2039
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
HYPMC_2039
Enzymes [BR:
hmc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HYPMC_2039
Peptidoglycan biosynthesis and degradation proteins [BR:
hmc01011
]
Precursor biosynthesis
Racemase
HYPMC_2039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
CCB65261
UniProt:
F8JDJ1
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All DBs
Position
complement(1933300..1934442)
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AA seq
380 aa
AA seq
DB search
MTVNARMPESVARATGTITVDLGCIAANWRALADKVAPARCAAVVKADAYGLGAERVIAT
LARAGCTAFFIATPGEAETARRIAPDADIYALDGLVGNTAAAFAHLAVKPVLSTLDDVVA
WSALCRARGERLPAAFHIDTGLHRLGLPVRDVRRLVAEPSMMAGIELDLVMSHLASADNP
RDPKNREQLLTFETLSALFPGVARSLAASDGLMLGPSYHFDLVRPGYALYGGQASQIAPA
PVHAAVTVAARILAVADVAPGETVGYSATWRAKRPSRIATIAAGYADGVPRNASAPDGRP
GGHVLISGHLAPIVGRISMDLITVDVTDLPDGAAMPGEFAKLIAEGLTIEDAGFSAGTIG
YEILTRLGNRFTRLYLDENP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaatgcgcgaatgcccgagagcgtagcaagggcgacgggaacgatcaccgtt
gacctcggatgcatcgctgcgaactggcgggcactggccgataaggtcgcgccggcgcgt
tgcgctgccgtcgtcaaagccgacgcgtacgggcttggcgccgaacgcgtcatcgcaacg
cttgcgcgggcgggctgcaccgcttttttcatcgcgactccgggcgaagccgaaacggca
cgccgcatcgcgccggatgccgacatctacgcgctcgacggtctggtcggaaacactgcc
gccgcgttcgcgcatctcgccgtgaagccggtgctatcgacgctcgatgacgtcgtcgcc
tggtcggcgctctgccgcgcgcggggcgaacggcttcccgcagcatttcacatcgacacc
ggcctgcatcgcctcgggcttcccgtgcgcgacgttcgccgtctcgtcgccgaaccgtcg
atgatggcgggcatcgaactcgacctggtgatgagccatctcgcctcggccgataatcca
cgcgatccgaaaaatcgcgagcaactgctgacgttcgagacgctgtcggcgctgtttccc
ggcgtggcgcgaagcctcgctgcctccgatggtttgatgctcgggccgtcctatcatttc
gatctcgtcaggcccggctacgcgctctacggcggacaggcatcgcaaatcgccccagcg
ccggtacacgccgccgtcaccgttgcagcgcgcattctcgccgtcgccgacgtcgccccc
ggtgaaacggttggctactctgcgacgtggcgcgccaagcgcccgagccgtatcgccacg
attgccgccggatatgccgatggtgttccgcgcaacgccagcgcgccggatggccgcccc
ggcggacacgttctcatcagcggccacttggcgccgatcgttggccgcatctcgatggac
ctcatcaccgtcgacgtcaccgatctgcctgacggtgccgccatgcccggcgaattcgcg
aaactcattgctgaaggtctgacgatcgaggacgccggattctcagccggaaccatcggc
tacgaaatcctgacacgcctcggcaaccgcttcacgcgcctctatcttgatgagaatccg
tag
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