Hyphomicrobium sp. MC1: HYPMC_3868
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Entry
HYPMC_3868 CDS
T01557
Name
(GenBank) ATP dependent DNA ligase
Organism
hmc
Hyphomicrobium sp. MC1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
CCB67078
UniProt:
F8J5G8
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Position
3705630..3707681
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AA seq
683 aa
AA seq
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MRVFARLLDSLVYTQSRNRKVALLGHYFRTAPDPDRGWALAALTDGVPIRIPLRRMLSDL
VSRFVDPVLYRLSRDYVGDTAETVSLLWPDDRVVVATPDVAEAAETQDDVPEKPKQLVLD
LTPTARQSPTARLTPTARLTPTARLTPTARLTPTPSPSPQGGGESFTSPSPRVREEGWGE
GQPWPNVSAPRPLPVEEGESDNGNSHLPSTMGVPTSPLPLTGRGRGWGEAGHNSGEPPEL
ALGAVIEAMADGTTAQRTERLGHLLDQLDATGRWALLKLIGGAPRVGVSARLARTALAEC
YGRDVSEIEEIWHALTPPYLDLFQWLDGKAERPDPGSKPVFRPVMLAHPIEEEDWPRLSP
EDFSAEWKWDGIRVQIAARGGEVKMFSRQGDDISGAFPEIRSAFHGHDCVVDGELLVMRE
GEIAPFNDLQQRLNRKTVTAKMMQMYPPHVRLYDLLFDGAEDLRGLSFEDRRARLEAWHA
KHHPRLTDISALVAFKTFEELGELWASARAEGIEGLMLKRRASVYQAGRVKGEWFKWKRA
ALTLDCVLMYAQRGSGKRSSYYSDYTFGVWKTDDNGEKQLVPVGKAYSGFTDEELLELDK
WIRGHTTEAFGPVRAVEPELVFEVAFDAVQPSTRHKSGVAMRFPRIHRIRWDKPAAEADT
LESVLRLIGGATAATTAEQSRLA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtattcgcccgtctgctcgatagtcttgtctatacgcagagccgcaatcgcaaa
gtcgcgctgcttggccattactttcgaacggcgcctgatcccgatcgcggctgggcgctc
gcggcgctgacggacggcgtgccgatccgcattccgctgcggcgcatgttgagcgatctc
gtctcgcgtttcgtcgatccagtgctttatcggctatcgcgcgactacgtcggcgacacg
gcggagacggtgtcgctgctctggccggacgatcgggttgtcgttgcgacgccggacgtt
gcggaggctgccgaaacccaagatgacgtgccggaaaagccgaagcagcttgttctggat
ctcacccccaccgctcgtcagtcccccaccgctcgtttgacccccaccgctcgtttgacc
cccaccgctcgtttgacccccaccgctcgtttgacccccacccctagcccctccccgcaa
gggggaggggaatcgttcacttctccctcgccccgcgtgcgggaagagggctggggtgag
gggcagccgtggccgaatgtttccgcgcctcggcctctccccgtggaggaaggagagagt
gacaacgggaactctcacctgccctccacgatgggcgttcccacttctcccctccccttg
acggggaggggtcgggggtggggtgaagcgggacataactcaggcgagccgccggagctt
gcgcttggcgcggtcatcgaggcgatggcagatgggacgacggcacagcgcaccgagcgg
cttggccatctgctcgatcaactcgatgcaactggacgttgggcgctcctgaaactcatc
ggcggggctccgcgcgtcggcgtgtctgcacgactggcgcggacggcgctggcggaatgc
tacggtcgcgatgtctcagagatcgaagagatctggcacgcgctgacgccaccctatctc
gatctcttccaatggctcgacggcaaagccgagcggcccgatcctggctcaaagcccgtc
ttccggccggtcatgcttgcgcatccgatcgaggaagaagattggccgcggctttcgccg
gaagatttttcggcggaatggaagtgggacggcattcgcgtgcagatcgcggcgcgtggc
ggcgaggtgaaaatgttctcgcgccagggcgatgacatctctggcgcgtttcccgaaatt
cgcagcgcctttcatgggcacgattgcgtcgtcgatggcgagttgctcgtcatgcgcgag
ggcgagatcgcgccgttcaacgacttgcagcagcgtctcaaccgcaagaccgtgacggcg
aagatgatgcagatgtatccgccgcatgtgcggctctacgatctgttattcgatggagcg
gaagacttgcgcgggctgtcgtttgaagaccggcgcgcacggctcgaagcgtggcacgcg
aagcatcatccgcggctgacggatatttcggcgctcgttgcattcaagacgtttgaagag
ctgggcgagttgtgggcgtcggcgcgagcggaaggcatcgagggcctgatgctgaagcgg
cgcgcgagcgtttatcaggcaggccgcgtcaaaggcgaatggttcaagtggaagcgcgcg
gcgctaacgctcgactgcgtgctgatgtacgcgcagcgcggctcgggcaaacgttcgtcg
tactattccgattacacgttcggcgtctggaagaccgacgacaacggcgagaagcagctc
gttccggtcggcaaagcctattcgggatttaccgacgaagaactgctcgaactcgacaaa
tggatcagggggcacacaacggaggcgttcgggccggtgcgcgccgtcgagccggagctt
gtgttcgaagtggcgttcgatgccgtgcagccgtcgacgcggcacaagtcaggcgtcgcg
atgcggttcccacgcattcaccgcatccgctgggacaagcccgcggccgaagccgacact
ctggaaagtgttctgcggttgatcgggggcgcgacggccgcaacgactgcggagcaatca
cgtctcgcgtaa
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