Hydra vulgaris (swiftwater hydra): 100198293
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Entry
100198293 CDS
T01080
Name
(RefSeq) uncharacterized protein LOC100198293 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100198293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100198293
03021 Transcription machinery [BR:
hmg03021
]
100198293
03036 Chromosome and associated proteins [BR:
hmg03036
]
100198293
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Helix-turn-helix
ARID
100198293
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100198293
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100198293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
PGDH_inter
RFX_DNA_binding
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
100198293
NCBI-ProteinID:
XP_047122985
LinkDB
All DBs
Position
2:complement(18793366..18817405)
Genome browser
AA seq
1502 aa
AA seq
DB search
MSIAETTLELTFQKDQDNFIGKLQEFHALRGNAFERIPTFGGQSLDLYALYNTVISFGGI
DEVTKKGKWEQVFKTLGYPPCTNADFALKQHYSRFLEAYEKIFFLGEDVDDRLFPDKYKW
QNSRSKAVFKHSKPGVLGEFRSHNFDRIMLSLLSGLENEVDFALNICTLLSNVSNSIFNL
GKNCSILDLILAHSGFWCTDNSFDKEMCTEWFSRSGKNFLKFWNDSISDPFLKKVYNELY
NTEQDKVYDEHSFFSCGTSQEKSSEFARVLQISMILYNFSFEQINAMFLAQHSTAEKFLL
FSSFSSYNNIQNNSLDTLDNISEYITLKANEDFFTQQILRIIHLFCTSKDRFRRIRAKSI
LAKLARSENAKIIAENLSQEIYKILLDTISFPDISLVLASMDALFSLSGLCENTATSICL
VQGSMNLLTSLLTLQAESFGNHAIEGFRIVENKCSMFTPKNQAFLQSQYERSYIENNRAC
QPGMIAPPSKMHTPHLGNMHLPMPRLPPYHVLSQPTHHVLSQPTQIYPNLQPIQTYPNQQ
PIQTYPNQQPINTYPNQQPIQAYPNQQPIQTYPNQQPTQAYPNQQPIQAYPNQQSIQAYP
NLQLSKADASNVSYGNQTNEFVEVDSETYAVHWMSAYYEPHPSNNILLSTIYADYEQVSK
SSSRKGILSFEAFQVILRAILPPHLAQIILIDSNGTLAVSGIQRKAIPLYVQSVIPAKKC
GEEVKISNDISQNETFNKLPNTHESENVSSQLNGNSEKPVSCDRRLKTGEGYYEVIEKLK
IESEGHFMQFHLHRQHLQALQVQIHQLMQTADVEHVPATVIKDIQIRAQNHQQQMQNHYQ
KLLQLTNLTEQVHSKMIQQDDVPKGSIKTNDSFKTPDKEVTQESFLFERNGKLENEFNNS
SNHLLTDQKSLNKFSSIKPDQVTSTNPHTLIPHLPFKNESTVQPPIVSGDLIRKKLSPSS
SPLSSPKKTKSKRGFNNPLDYPGFPQISQNNRLARTSPQKKVSLLTNGISLNGATHPVTP
VPAVHSSTPVVQPFSTKFLNISSQEKNHLPFQNNTESLVNFQTSSSIMNHFSKTFTESKL
NGVDVNYQTNCFNSKFKKQLDNNSVETPNPVCSIPNSTSAPSFSPLIKVNHLNGHQINGN
FERKIEIQKENIKSSLSEESINDDFVDFERICDSDHISSEAVLQKQKKTLNEKEINNIES
PKGNYLIENSHEKTVNSENHNDEKVDQLQNCLKPDHKELNFLNSKLMLGKMASQIKPNGI
ETKNNSFKDVTVNDFESPVTVINREDSRVNCLRLPLGNSNFIRTSDLHTNNRTPKISPQT
SIISNDFVQKSDNERNHINLCNLTTLQTCRNMFKCKWNDCYFAFHCESELFEHMVMNHAP
TDGKMQHCNVAGCFSSQMLRGSFILHLQDVHFSSNTFLNYWKVEHENESPVTRSLRFTAA
LILRNIAKNSPCAKSLLLRHEDLIARVAMSTSEAASAAAECLFELYNNAKTETSDTEDLD
YL
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgcagagaccacattggagcttacttttcaaaaagatcaagataatttcatt
ggaaagcttcaagaatttcatgctcttagaggaaatgcgtttgaacgaattccaactttt
ggaggacagtcattagatttatatgcactttataacactgtaatttcttttgggggtatt
gatgaggttactaagaaaggaaaatgggaacaagtttttaagacattaggatatccacca
tgcactaatgcagattttgctttgaagcagcattattcaaggtttctagaagcttatgaa
aagattttctttttgggagaagatgttgatgacagattgtttcctgataaatataaatgg
caaaactcaagaagcaaagcagtgttcaaacattctaaaccaggtgtcttaggagaattt
cgttcacataactttgaccgtattatgttgtctcttctttctggactcgaaaatgaagta
gattttgcattgaatatctgcacacttttatcgaatgtttctaattcaatatttaatctc
ggaaagaactgttccatcctggatttgattttggctcacagtggattttggtgtacagat
aattcatttgataaagaaatgtgcacggagtggttttctagaagtggaaagaatttttta
aagttttggaatgattcaattagtgatccttttttaaaaaaagtatacaatgagttatac
aatacagaacaagacaaagtgtatgatgaacactcttttttttcttgtggtacatcccaa
gagaaatcatcggaattcgcaagagttttacagatctcaatgattctgtataatttttca
tttgagcaaataaacgcaatgtttttagcacaacactcaacagctgaaaaatttttattg
ttttcaagtttttcatcttacaacaatatccaaaataacagtttggatactcttgacaat
atatcagaatatataacattaaaagctaatgaagattttttcacccagcaaatcctaaga
attattcatttgttttgtacttcaaaagatagatttcgaagaatacgagcaaaatccata
ttggctaaactggcaaggagtgaaaatgcaaaaatcattgcagaaaatttatctcaagaa
atatataaaattttattggatacaatttcttttccagatatatcacttgttcttgcaagt
atggatgcattgttttctctctctgggttatgtgaaaatactgctacttcaatttgctta
gttcaaggaagtatgaatttgcttacaagcttacttacacttcaagctgaatcttttgga
aaccatgcaattgaaggttttagaattgttgaaaacaagtgctctatgtttacacctaaa
aatcaagcttttttacaatcacaatatgaaagatcttatatagaaaataatcgtgcatgt
caacctggaatgattgcaccgccatctaaaatgcatactcctcatttaggaaacatgcat
ttaccaatgccaaggttaccaccttaccatgtattatctcaaccaactcaccatgtatta
tctcaaccaactcagatatatcctaatctgcaaccaattcagacatatccgaatcagcaa
ccaattcagacatatccgaatcagcaaccaattaatacatatccgaatcagcaaccaatt
caggcatatccgaatcagcaaccgattcagacatatccgaatcagcaaccaacccaggca
tatccaaatcagcaaccaattcaggcatatccaaatcagcaatcaattcaggcatatcca
aatctgcaattaagcaaagctgatgcttcaaatgtaagttatggtaatcaaacaaacgag
tttgttgaggttgattctgaaacgtatgctgtgcattggatgagtgcatattatgagcct
catccttcaaacaatatacttttgtcaaccatttatgctgactatgagcaagttagtaaa
agtagttccagaaaaggtattttgtcatttgaggcatttcaagttatcctgagggctatt
cttccaccacatcttgcacagataattttaattgattccaatggcactttagctgtgtct
ggtatacagaggaaagcaattccattgtatgtacagagtgtaattccagcaaaaaaatgt
ggagaagaagtaaagatttcaaatgatatttcacaaaatgaaacttttaataaactacct
aatactcatgaaagtgaaaatgtttcaagtcagttaaatggaaatagtgaaaagcctgta
tcttgtgatagaaggctaaagacaggtgaaggttattatgaggtaattgaaaaactaaaa
attgaatctgaaggtcattttatgcagtttcacttgcatcgtcagcatttacaagctctg
caagtgcaaattcatcagttgatgcaaacagcagatgttgagcatgttcctgccacagtt
attaaagatattcaaataagagcacaaaaccatcaacaacagatgcagaatcattatcaa
aaattgcttcagctaacaaacctgacagagcaagttcacagtaagatgattcaacaagat
gatgtacctaaaggaagcataaaaacaaatgatagctttaaaactccagataaagaagtc
acacaagagagtttcttatttgaaagaaatgggaaactggaaaatgaatttaataattca
tcaaatcatttacttactgatcaaaagtctttaaataaattttcatcaattaaacctgat
caagttacttctacaaatcctcatacattaattcctcatttaccctttaaaaacgaaagt
actgttcaacctcccatagtttcaggtgatcttattaggaaaaaattatctcctagtagt
tcacctcttagttccccaaaaaaaactaaaagtaaaagaggatttaacaatccattagat
tatcctgggtttccccaaatttctcaaaacaacaggttagcacgaacttcaccgcaaaaa
aaagtaagcctactgacaaatggaatatctctaaatggagctacacatcctgttacacca
gttccagctgtacattcaagtacaccagttgtgcaacctttttctacaaaatttttaaat
atttcttctcaagagaaaaatcaccttccttttcaaaataatacagaatctttagtaaat
tttcaaacctcttcaagtattatgaatcattttagtaaaacatttacagaaagcaagtta
aatggcgttgatgtaaattatcagacaaactgttttaattcaaaatttaaaaaacaacta
gataataattcagtagaaactccaaaccctgtttgttcaattccaaattcaacctcagct
ccttcattttcacctctaattaaagtaaatcacttaaatggacatcaaataaatggaaat
tttgaaagaaaaattgaaatacaaaaggaaaatattaaatcaagtttaagtgaagaaagc
attaatgatgactttgtagactttgaaagaatttgtgattcagatcatatttccagtgaa
gctgttttgcaaaaacaaaaaaaaactttgaatgaaaaagaaataaataatattgaaagt
cctaaaggaaattatctaatagaaaatagtcatgaaaaaacagttaattcagaaaaccat
aatgatgaaaaggttgatcaacttcaaaattgtttaaaacccgatcacaaagagttgaac
tttttaaactctaaattaatgcttggcaaaatggcatcccaaattaaaccaaacggaata
gaaacaaaaaataatagtttcaaggatgttacagttaatgattttgaatcacctgtcaca
gttataaatagggaagattcaagagtaaattgtttaagacttccacttggcaattcaaat
tttattaggacttcagatttacatacaaacaatcgtacccctaaaatttcgccccaaaca
tcaattatttcaaatgattttgttcaaaaatctgataatgaaagaaaccatataaattta
tgtaacttaacaacgctacaaacttgtcgtaatatgtttaaatgcaaatggaatgactgt
tattttgcttttcattgtgaatccgaactatttgagcatatggttatgaatcatgctcct
accgatggcaaaatgcagcattgtaatgtggctggctgcttttcttcacaaatgttgcgt
ggcagttttattttacaccttcaagatgtacattttagttctaatacatttcttaactat
tggaaagtagagcatgaaaatgaatcaccagttactagaagccttcgttttacagcagct
cttattttaaggaatattgcaaagaactctccatgtgctaaatctcttcttctacgtcac
gaagatttaattgccagagtagccatgtcgacatcagaagcagcatcagctgctgccgaa
tgtctctttgaactctacaataacgccaaaacagaaactagtgataccgaagacttggat
tatttatga
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