Hydra vulgaris (swiftwater hydra): 100198740
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Entry
100198740 CDS
T01080
Name
(RefSeq) serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100198740
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
100198740
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
100198740
NCBI-ProteinID:
XP_002160500
UniProt:
A0A8B6XJF3
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Position
12:18016414..18035531
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AA seq
803 aa
AA seq
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MGDSDEEYDRRRGRDKFRGERNDYDARRPPPRAYDRARGERVRTSHENNNWENKASKRDY
YGRDAHERRDSFGRNSSPPSKRSRREWEEQSPWRGSDSNALMSHDNKINGSPSLMGFKEF
ILQQEDDIDESEAIRRYQEYKVEFKRTQINDFFVLQKDKEWFKEKYHPIESSARKAVIRN
GLRKRLRVFLDLYEAGYIDNVSLNIIATSEVLKFLDRVIIKLEGGSKEDLDALDIPPVKD
KDVKTDGDGALKEDDRGEKKQSEEHGVDDGDDTKEPLPPGMEDDEELEIPGIGNEEKLEV
KYDGVNDKKNDEETNDATLVKNDEEKYVYDGLHMKRPVSLFMRNIPSNVSRHDLVTVCER
YPGYLRMALSDPSPDRRWARRAWATFEHMVNIKDICWNLSNIRIKDCELAPVVNRDVSHR
IRPVNGITCSPMTMLLDAKLALDLIKILDKKFKLYEKEELPNNHVTEIPTESSVNKDVDD
TSEVEENKENKEEKVKKKVEEHFDLPDENPIISNLPSEIVEAVPMKIKDEEDGKIDHPIV
VDKKLEKSLDLLLLYLRVVHCVDYYNANEYLHEDEMPMRCGIMHVRDQPILSASKKDVDE
WFQNIKTKLEHIFNDDELADDDEAVKLGKKDEEIEVENFIKANTQEITPDKWLCPLSGKK
FRGPDFIRKHIMMKHLNSVENVKTEVMFFNNYVYDSKRPCFPDPKLRVNPAITTTFTPVT
SNRTWVPSARQPASFATPRPPYNASVATPHSLSTSQPPLITQETYGRMSTYPPKQRRGGS
AIFRDRKVIKYRDLDAPEESDFF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagtgatgaagagtatgacaggcgacgcggtcgtgataaatttagaggtgaa
agaaatgattatgatgcacgtagacctccacctcgagcctatgatcgtgcaagaggtgaa
cgagtaagaacctctcatgaaaataataactgggaaaacaaggcttcaaaaagagattat
tatggtagagatgcccatgagcgcagagatagttttggtcgtaactcaagcccaccatca
aaaagatctaggagagaatgggaagaacagtcaccatggagaggatcagactcaaatgct
ttaatgtctcatgacaacaaaataaatggtagtccttctctgatgggttttaaagagttt
atattgcaacaagaagatgatattgatgaaagtgaagccatacgtcgataccaagaatat
aaggtggaatttaagcgaactcagataaatgacttttttgttttgcaaaaagataaagaa
tggtttaaagagaaatatcatccaatagagagttcagctcgtaaagctgttattcgtaat
ggattaagaaaacgtctcagagtttttctggacttgtatgaagcaggatatattgacaat
gtttcattgaacattattgcaacctctgaagtattaaaatttttagatagagttattata
aaacttgaaggtggcagtaaagaagatctagatgctcttgacattcctcctgtcaaagac
aaagatgttaaaacagacggtgatggagcattaaaagaagatgatcggggagagaaaaag
caaagcgaggaacatggagttgatgatggtgatgatacaaaagaaccacttccacctgga
atggaagatgacgaagaacttgaaatacctggaataggcaatgaagagaagttagaagtt
aaatatgatggtgtcaatgataagaaaaatgatgaagaaacaaatgatgctactttggtc
aaaaatgatgaagaaaagtatgtatatgatgggttacatatgaaaagaccagtttcattg
ttcatgcgcaacattccttctaatgttagtcgtcatgatttagttacagtgtgcgagcgc
tacccaggttacttacgtatggcactctctgatccatctcctgatcgcagatgggcacgt
cgtgcttgggctacttttgaacatatggtgaatattaaggatatatgttggaatttaagc
aatatcagaataaaggattgtgagcttgcacctgtagttaaccgtgacgtctcacacaga
attcgtcctgtaaatggcattacatgttctccaatgactatgctactggatgcaaagttg
gcattagatttaattaaaattttagataagaagttcaaactttatgaaaaagaggaattg
ccaaataaccatgttactgaaattccgactgagagttctgttaacaaggatgttgatgat
actagtgaggttgaagaaaataaagagaataaggaagaaaaagtgaagaaaaaagtagag
gagcacttcgatttacctgatgaaaatccaattatttcaaatttgccatcagaaatagta
gaagcagttccaatgaaaatcaaagatgaggaagatggaaaaatagatcatcccatcgtg
gttgataaaaaacttgaaaaatcattggatttgcttttgctgtatttacgtgttgtccac
tgtgttgattattacaatgctaatgagtatctgcatgaggatgagatgccaatgaggtgt
ggaattatgcatgtacgtgatcagccaattttatcagccagtaaaaaagatgttgatgaa
tggtttcagaatatcaaaactaagttagaacatattttcaatgatgatgagttagctgat
gatgatgaagcagtgaaattaggaaaaaaagatgaagaaattgaagttgaaaactttatc
aaagctaacactcaagaaataacaccagacaaatggctatgcccacttagtggtaaaaag
tttcgcggaccagattttattagaaaacatattatgatgaagcacttaaatagtgtagag
aatgtaaaaactgaagttatgtttttcaacaattatgtatatgatagcaagcgcccatgc
tttcctgatcctaaactgcgtgtaaatccagctataactactacctttactccagtaaca
tcaaaccgtacatgggtaccttctgctagacaaccagcttcgtttgcaacacctcgtcct
ccttataacgcatctgttgctaccccccattctttatctacttctcaaccaccattaata
acacaagaaacatatggtcgaatgagtacttacccaccaaaacaaagacgtggtggttct
gccatttttagagatcgtaaagttattaagtatcgcgacttggacgctcctgaggaatca
gattttttttaa
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