KEGG   Hydra vulgaris (swiftwater hydra): 100200610
Entry
100200610         CDS       T01080                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100200610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hmg03041]
    100200610
Spliceosome [BR:hmg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100200610
 Complex B
    100200610
SSDB
Motif
Pfam: RRM_1 RRM_7 Transformer Orthopox_F14 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 100200610
NCBI-ProteinID: XP_047143469
LinkDB
Position
11:complement(39417186..39433890)
AA seq 459 aa
MSGLIFESDSTILLQRSNKFESKKYSSFESEDRMEDSRHRSRSRSRDRDRKRRSRSRSRD
RKRRKSRSRSRDRRSSRSTPKTKRNTLWDVPPKGYEDITPVQFKALRASGQVEMPTPLSG
GVIPATALPQGAQMTMQARRLYCGNLPFGITEDLMVDFFNAKMRESDMARQPGNPVLACQ
INLEKNFAFLEFRSVEETTLAMAFDGIILQGQALKIRRPKDYQPIPGINGMAYPTLFAES
QATHIPGVVSTVVSDTINKVFVGGLPNYLNEDQVKELLSTFGELRAFNLVKDSATGLSKG
YAFCEYVDIGITDVAIAGMNGMQLGDKKLIVQRASVGSKTMTAQLNIPGFDLNKEITATN
ILCLMNMVVAEELMDDEDYDEIFEDIREECSKYGRIRSMQIPRPNNEFLVSGIGKVFIEY
ATSGESKVASEALAGRKFANRVVVTAYYDPDSYHRHDFS
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtctggattgatttttgagtcagattctactattctacttcaacgaagtaacaagttt
gaatctaaaaaatattctagttttgaatcagaagaccgcatggaagattcaagacacaga
agtcgatcaaggagccgtgacagagatagaaaacgcaggagtcgttctcgaagccgcgat
agaaagcgaagaaaaagccgttctcgaagtcgagatcgccgatctagtcgttcaactccc
aaaaccaaaagaaacacgctttgggatgtccctcctaaaggttatgaagatattactcct
gtgcaatttaaagctttaagagcttccgggcaagttgaaatgccaacaccactttctggt
ggtgtgataccagccactgctttgcctcaaggtgcacaaatgactatgcaagcaagaaga
ttatattgtggaaatttaccttttggtattacagaggatcttatggtcgattttttcaat
gcaaaaatgcgagagtctgatatggctagacaacctggaaatcctgtcctagcttgtcaa
ataaatttagaaaaaaattttgcatttttagaatttcgttccgttgaagaaacaacactt
gcaatggcttttgatggtatcattctgcaggggcaagcattgaaaattcgaagaccaaaa
gattatcaaccaatccctggaataaatggtatggcatatcctacattgtttgctgaatca
caagctactcatataccaggtgtggtttcgactgttgtatccgatactataaataaagtt
tttgttggtggtctaccaaactacttgaatgaagaccaggtgaaagagttattgtcaaca
tttggagaactaagagcatttaatctggtcaaagattcagctacaggattatctaaagga
tatgcgttctgtgaatatgttgatataggaattactgatgtggctatcgctggcatgaat
ggaatgcaattgggtgataaaaagttaattgttcaaagagctagtgttggatcgaagact
atgactgcacaactaaacattcctggttttgacttaaacaaagaaattacagccacaaat
attctttgtcttatgaacatggtggtagcagaagaacttatggatgatgaagattatgat
gaaatctttgaagacatacgtgaagaatgttcaaaatacggacgaataagaagtatgcaa
ataccccgacctaacaacgaatttctggtttctggtattggaaaagtttttattgaatac
gcaacttctggcgaatcgaaagtcgccagtgaagcgcttgctggaagaaaatttgctaac
agagttgttgttacagcatactacgacccagattcttatcatcgacatgatttttcttag

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