Hydra vulgaris (swiftwater hydra): 100205478
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Entry
100205478 CDS
T01080
Name
(RefSeq) serine/arginine-rich splicing factor 10-like
KO
K12900
serine/arginine-rich splicing factor 10
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100205478
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
100205478
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmg03041
]
100205478
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100205478
Spliceosome [BR:
hmg03041
]
Common components
Common spliceosomal components
SR proteins
100205478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
100205478
NCBI-ProteinID:
XP_047137882
LinkDB
All DBs
Position
8:complement(14070033..14082072)
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AA seq
202 aa
AA seq
DB search
MSGNRYARPPNTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQF
EDIRDAEDALYHESHARLHGRELDIQYAEGDRKTPGQMRTRESTGSYSDNGRFGGRRGGR
YSRSRSRSRSPRRRRRYSSRSRSRSPRRRRSVSRSPVKRSPSHSPRKSYSPGRSASPRKS
RSASRSRSRSRSRGSSTKENGD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaatcgctatgcaagaccaccgaatacatctctttatatacgaaatttaagt
tcttcaacgaggagtgatgacttgagaaggatgtttgcaaagtatggtccgatacgtgac
atctacattcctttggattattatactcgtgaaccaagaggcttctgttatgttcaattt
gaagacattagagatgcagaagatgctttatatcatgaatctcacgcaaggttgcatggg
cgagaacttgatattcaatatgctgaaggagatagaaaaacacctggtcaaatgagaact
cgagaatccactggttcttattcagataatggcaggtttggaggacgtaggggaggtcga
tattcaagaagtcgcagcaggtcaaggtcacctagacgtcgacgcagatactcttctaga
tctcgttctagaagcccacgaaggagacgaagtgtttctagaagtccagtaaagcgttca
ccttctcatagccctcgtaaatcatactctcctggtagatcagctagtccccgaaagtct
cgtagtgctagcagatctagatctcggtctaggtcccgtggttcctctacaaaagaaaat
ggagattaa
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