Hydra vulgaris (swiftwater hydra): 100213322
Help
Entry
100213322 CDS
T01080
Name
(RefSeq) Werner syndrome ATP-dependent helicase homolog
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmg03032
]
100213322
03400 DNA repair and recombination proteins [BR:
hmg03400
]
100213322
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100213322
DNA replication proteins [BR:
hmg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100213322
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
100213322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
HRDC
RQC
RecQ_Zn_bind
ResIII
Perilipin_2
Motif
Other DBs
NCBI-GeneID:
100213322
NCBI-ProteinID:
XP_012558515
UniProt:
A0A8B7DJX3
LinkDB
All DBs
Position
2:16689124..16731886
Genome browser
AA seq
1095 aa
AA seq
DB search
MSQSDLSSELRELLVNLKWANTLVNQLKKSLPEFQNKNFKSILKIAEEANSCINVFCTTI
DTVLNSNKSCSDEDIVKPNKNNIENEDEYSTDVSESMINDDEDKLSHPSSDELNLLLADL
PNYDDQTDVIHSEINQLGNCVKATQQLKNEQIEIKTKEKDLVDFAKFDDEGDLDNTFASI
ELECEKVISKAAEEDVKETLDDCEPPTKEHINILKEYFGFSKFRPMQWKIIRSVIYDKQD
NCVVMATGSGKSLCYQFPPVFTHGVAIVVSPLISLMEDQVQALNVANINACYLGSAQTDS
KVLSKVFDGYYRLVYVTPEYITNSESFLKDLDKKLGLTLVAIDEAHCVSQWGHDFRLSYR
KLHLIRKLIPSVPIIALTATATPLVRNDICNNLLMRKAIIRCTGFDRKNLYLEVRNKVSA
HHDLTSLMIEENLNGVRKYRFCGTTIVYCPTKKKVEEIANTLIGFGLTCEPYHAGLTLPQ
RKKTHNKFIRDELDCIVATVAFGMGIDKPDIRMVIHYGAPRDIESYYQEIGRAGRDGQPS
FCYAFYNCADFAINRYFLAEVTDPKFKEYKNEMITKMEQYLMTSSCRRDAILAHFDPSIK
NSGGHKDCCDNCRNRILNPNCFTSKILKGATDVNVGVDVKILLKAIQVTGDGMYGLNVPI
LLIRGSLSQKLPAKFSKLKEHGAGKNKSEKYWKSLGHQILNMGLLKEKPVDFGFGSTICM
TAKAKQWLQENLCTEEPQFKISDPTKDLLDEIQRALPPDKSDPARITVVTKTLPTTPVET
PFSGDCESLLKLLTKLKFDDNKTVENNESFDNELHGRLLNIRRQLANKLDIAPYMIATNK
NLQDIIKFRPSCKSSLLTIDGISEHLCQRIGDAFIKEIEEFCREKNLSLDNMPNKPVNEN
SSITLKNLTLTRGDGYKKPLSGTQLESYELYQEQKSSVSEVAKQRSLLEDTIYGHLSAAL
VSGKSIDFNRLEISEHEIAKVVQVIRSKEINSDIRRLHPIKDMLPVDIGYGKIRFIITML
EITYGVTDNMQTPAIIANNFDYVPKASKVDAYFKKDEASPKVDCQVAGKRKVPEWMSTSS
GLTYKRTSCKNKKLF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcagatctttcaagcgaactcagagaacttttagttaatttaaaatgggct
aacactcttgtgaatcagttgaaaaaatcgttacctgaatttcaaaataaaaattttaaa
agcattttaaaaatagcagaagaagcaaactcatgtataaatgttttttgcacaactatt
gacaccgttctcaattcaaataagtcttgcagtgatgaagatattgtaaaaccaaataaa
aataatattgagaatgaagatgagtatagtacagatgtttctgaaagcatgattaatgat
gatgaagataaattgtcacacccatcatcagacgaactaaatttgctacttgcagacctt
ccaaattatgatgatcaaacagatgtaattcattctgaaattaatcaactaggaaactgt
gttaaagctacacaacagttaaaaaatgagcaaatagaaataaaaacaaaagaaaaggat
ttagttgatttcgccaaatttgatgatgaaggtgatcttgataacacatttgcttcgata
gaattggaatgtgaaaaggtaataagtaaagccgcagaagaagatgttaaagaaacattg
gatgattgtgagcctcctacaaaagagcatattaatattttaaaagagtactttggattt
tcaaagtttagaccaatgcaatggaaaataatacgttctgtaatctatgataaacaagat
aattgtgttgtcatggcaacaggttctggtaaaagtttatgttaccagtttccacctgtc
ttcacacatggagtggcaattgttgtttcaccactgatatctttaatggaggaccaagtc
caagcattaaatgttgctaatataaatgcttgttatttgggaagtgcacaaactgactcg
aaggttctaagcaaagtttttgatggttattatcggttagtttatgtcacaccagagtat
ataactaattcagaatcatttttaaaagaccttgataagaagcttggtttaacattagta
gcaatagatgaagcccactgtgtttcacaatgggggcatgactttaggctgtcttatcga
aagttacatttaataagaaaactcatcccatctgttccaatcattgctttaactgccacg
gctacaccccttgtgcgtaatgatatttgtaataatttattaatgcggaaagctattatc
agatgcactggttttgacagaaagaatttgtacttagaggtaagaaataaagtgagtgca
catcatgatttaaccagtttaatgatagaagaaaatctcaacggagtaagaaaatacagg
ttttgtggtaccacaatagtttattgtccaacaaaaaaaaaagttgaagaaatagctaat
acattaattggatttggactcacatgtgaaccttaccatgctggattaacacttcctcaa
agaaaaaaaacacataataaatttattagagatgagctagattgtattgtagcaacagtg
gcatttggcatgggtattgacaaacctgatattaggatggtaatacattatggtgcacca
cgggatatagagtcatattatcaagagattggaagagcagggagagatgggcaacctagc
ttttgttatgcattttataattgcgctgactttgcaattaataggtattttttggcagag
gttactgatccaaaatttaaagagtataaaaatgaaatgatcacaaaaatggagcaatat
ctaatgacttcttcttgtagaagagatgccattcttgcacattttgatccatcaatcaaa
aattctggaggacataaagactgttgtgacaactgccgcaatagaattctcaatccaaat
tgttttacatcaaaaattcttaaaggtgcaacagatgtaaatgttggagttgatgttaag
attttgttaaaagcaattcaagtgactggagatggaatgtatggcttgaatgttccaata
ttacttattcgaggatcgcttagccaaaaattaccagcaaaattttctaaattgaaagaa
catggagctggaaagaataaatcagaaaagtattggaagtcacttggtcatcaaatacta
aacatgggattacttaaagaaaaacctgtagattttggatttggttctactatatgtatg
acagctaaagcaaaacaatggcttcaagaaaacttatgtactgaagagccacaatttaaa
ataagtgacccgactaaagatcttcttgatgaaattcaacgagctctacctcctgacaaa
tctgacccagcaagaataacagttgtaacaaaaactcttccaactactcccgtggaaaca
ccattctctggagactgtgaatctttacttaaattattgacaaaacttaaatttgatgac
aacaaaactgtggaaaacaatgaatcttttgataatgaattgcatgggcggctgcttaat
attagacgtcaacttgcaaataaattagatattgcaccatatatgattgctacaaataag
aacttgcaggacattataaaatttagaccaagttgtaaatcttctttgctaacaattgat
gggatatctgagcatttatgtcaaagaattggtgatgcttttataaaagaaattgaagag
ttttgtagagaaaaaaacttaagtcttgataacatgccaaacaaacctgttaatgaaaat
agctccattacgttaaaaaatcttactttaactcgtggcgatggttacaaaaaaccatta
tcaggtactcaattagaatcttacgaattgtatcaagaacagaagagttctgttagtgag
gtagctaagcaaagatcacttcttgaagataccatttatggacatctttcggctgctttg
gtttctgggaaatctatagattttaacagattagaaatatctgaacatgaaatagcaaag
gttgttcaagttattaggtcaaaagaaattaattcagatataagacggttacatcccata
aaggatatgttacctgtcgatattggttacggaaaaattcgctttataataaccatgctt
gagattacttatggtgtgacagataacatgcaaactcctgcaattattgcaaataatttt
gattatgttcctaaagcaagtaaagtggatgcttactttaaaaaagatgaagcatcccca
aaggtcgattgccaagtggcaggtaaaagaaaggtgccagaatggatgtcaacatcgtca
ggtttaacttataaaagaacaagttgtaaaaataaaaaactattttga
DBGET
integrated database retrieval system
