KEGG   Hydrocarboniclastica marina: soil367_01480
Entry
soil367_01480     CDS       T06192                                 
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
  KO
K11901  type VI secretion system protein ImpB
Organism
hmi  Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hmi02044]
    soil367_01480 (tssB)
Secretion system [BR:hmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   soil367_01480 (tssB)
SSDB
Motif
Pfam: T6SS_VipA
Other DBs
NCBI-ProteinID: QCF24731
UniProt: A0A4P7XD22
LinkDB
Position
319477..319983
AA seq 168 aa
MDSIHDKLSRVRKPRVHITYDVETEGAMVKKELPFVVGVMGDFSGNNNELKPLKERRFIQ
IDRDNFDDVLRRMSPKLKLKVDNKLADDDSQMSVELAFNSMDDFQPAAIVNQVEPLRQLM
ETRNKLRDLMTKVDRSEELEDLLERVLNNSDDLQKLSADLDSKGGSKE
NT seq 507 nt   +upstreamnt  +downstreamnt
atggacagcattcacgacaagctttcccgagtgagaaagccgcgcgtacacatcacttac
gacgtcgaaaccgaaggcgcaatggtcaagaaagaactgccctttgtggttggcgttatg
ggcgacttctccggcaacaataatgagctcaagccgctcaaagagcgtcgcttcatccag
attgaccgcgataattttgacgatgtcctgcggcgtatgagcccgaaactcaagctcaaa
gttgacaacaaactggcggacgatgactcccagatgtctgtggaattggctttcaactcg
atggatgattttcaacccgcagccatcgttaatcaggtcgaacctctgcgtcagctgatg
gagacacggaacaagctgcgcgatctcatgacgaaagttgaccgctcggaagagcttgag
gacctgttggagcgagtactcaacaactctgacgatcttcagaaactgagtgctgacctg
gacagcaagggagggagcaaggaatga

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