Heliomicrobium modesticaldum: HM1_0841
Help
Entry
HM1_0841 CDS
T00653
Name
(GenBank) sigma-54-dependent transcriptional activator (nifa/ntrc family)
Organism
hmo
Heliomicrobium modesticaldum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_4
PAS_9
PAS_8
PTS-HPr
HTH_50
Mg_chelatase
PAS_10
PAS_7
AAA_5
AAA
AAA_2
HTH_1
SpoVT_C
HTH_8
PdtaS_GAF
AAA_16
HTH_Tnp_ISL3
dCache_3
Motif
Other DBs
NCBI-ProteinID:
ABZ83719
UniProt:
B0TAR7
LinkDB
All DBs
Position
1158837..1161140
Genome browser
AA seq
767 aa
AA seq
DB search
MSTQWIDEIKAIIRHEKGLHARVAAMIVQKASELKRRYRVSLFLRHRDRKPVPATTLLQL
VSLAVQPGEAVWVSARPAEDTGETPFPADADAPCAERPGNEPPQAAIAVEELVRFLESDF
ALSDEQVQRQVDNLLQDSALTAGQVFASMADGLIVTDAHDVVTVFNPAAERIMGMRASDV
IGRKAKAVIAGSRMHIVAETGQPELGRRQMIGDAVILTNRTPIVVDGQVKGAVAVFEDIS
ALEKVTHELHEVKELKERLQLVLESVQDGICVVDREGCVTYVNPAYARIVNGRREDLIGR
DVRNLSPRGARRQALETGKPVLGHLAQKDGDVTVIADAYPIIVDGEVTGVVSIVKTLTDV
QTLAEKLNRMAARAEYLEQELRRAKKPGGAFARFIGQSGKVRDALAMAEKAAEGPATVLI
RGESGTGKELVAEGIHESGPRSKGPFIRVNCAAIPETLLESELFGHEKGAFTGAIKRKLG
KFELAHKGTLFLDEIGELDKGMQAKLLRVLQEKEISRIGGEETFTVDVKIIAATNQDLER
LVAEGRFREDLYYRLNVIPILLPPLRERKEDIPLLVEHFLQQTGREQGKALRGIHSDALE
ALMHYSWPGNVRELANLIERVVTLSDGPWITDSDLPTYLRERAAEENHEGRPLEERPAGG
RYGAGERGYNGREHKIGRSVGGISGSLFRENRWEEQGDAPLLTWEAYEQQIITLALRRHG
SFNAAAKALGLTHKTVAAKARKYGIDKNEAGAGPGKKGAALGKSINE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaacgcagtggatcgacgagataaaagcgatcatccgtcatgagaaagggcttcat
gcccgcgtggcagccatgatcgtgcaaaaggcaagcgaacttaagaggcggtaccgggtc
tccctctttttgcgtcaccgggaccgcaagccggtgccggccaccacgctgctgcaactg
gtctctctcgctgtccagcccggtgaggccgtctgggtgtcggcgaggcctgcagaagac
accggtgagacgccctttccggctgatgcagatgcaccttgcgccgaaaggccgggcaac
gagccgccgcaggccgccatcgccgttgaggaactggtgcgcttcctcgaaagcgacttc
gccctttctgacgaacaggtccagcgccaggtagacaacctcctccaggacagcgccctg
acagcgggacaggtctttgccagcatggctgacggcctgatcgtcactgacgcccacgat
gtggtcaccgtcttcaatccggccgccgagcggatcatgggcatgcgggccagcgatgtg
attggaaggaaggcgaaggcggtcatcgccggatcgaggatgcacatcgtcgccgagaca
gggcagccggaactggggcggcggcagatgatcggcgacgcggtcatcctcaccaatcgg
acgcccatcgtcgtcgacgggcaggtcaaaggcgccgtcgccgtctttgaggatatctcg
gcgctggagaaggtgacgcacgaactgcacgaggtgaaggaactgaaagagcggctgcag
ctggtcctcgaatcggtgcaggatggcatttgcgtcgtcgaccgggaaggttgcgtcacc
tatgtgaaccccgcctatgcccgcatcgtcaacggccgccgggaggacctgatcggccgg
gatgtgcggaacctgtcgccgcggggggcgcggcggcaggctttggagacgggcaagccg
gtattgggccatctggcgcaaaaggacggcgatgtgaccgttatcgccgacgcctatccc
atcatcgtcgatggggaggtgaccggggtggtctccattgtcaagaccctcaccgatgtg
cagacactggccgagaagctgaaccgcatggccgcccgcgccgagtatttggagcaggaa
ctgcggcgggcgaaaaaaccgggcggcgctttcgcgcgcttcatcggccagagcggcaag
gtgcgcgacgccttggcgatggcggaaaaggcggccgagggaccggcgacggtgctcatc
cgcggtgagagcggcaccggcaaggagctggtggccgaaggcatccatgaatcggggccg
cgatctaagggaccctttattcgcgtcaactgtgccgccatccctgagaccttgttggag
agcgagctcttcggccatgaaaagggcgccttcaccggcgctatcaaacgcaagctgggc
aagttcgagctggcccacaagggcaccctcttcctcgacgaaatcggcgagttggacaag
ggcatgcaggccaagctgcttcgcgtgcttcaggaaaaagagatcagccgcatcggcggc
gaagagacgttcacagtcgacgtgaagatcatcgccgccaccaatcaggacctcgaaagg
ctggtggccgaaggccgttttcgggaagacctttactaccggttgaatgtcattccgatc
ttgctgccgccgctccgtgaacgcaaagaagacatccctctattggtggaacatttcctc
cagcagaccgggcgggaacagggcaaggcgctgcgaggcatccacagcgacgcactggag
gcgttgatgcattacagctggccgggcaacgtgcgcgagctggccaacctgatcgagcgg
gtcgtcaccttgagcgacggcccttggatcaccgacagtgatctgcccacctacctccgg
gagcgggcggccgaggaaaatcatgaagggaggcctcttgaagagcgacctgctggcggg
agatacggcgcaggggaacgcggatataacggaagagagcacaagattggcaggtcggtc
gggggaatcagcggctcccttttcagggagaataggtgggaggaacagggtgacgcgccg
ctgttgacctgggaagcatacgaacagcagatcatcaccttggctctgcgccggcacggc
agcttcaacgccgccgccaaagccctgggactgactcataaaaccgtggcggcgaaagcc
cgcaagtacggcatcgacaagaacgaagccggtgcaggccctgggaaaaaaggagcggcc
ttgggaaaaagtatcaacgaatga
DBGET
integrated database retrieval system
