Hyphomonas neptunium: HNE_3559
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Entry
HNE_3559 CDS
T00397
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hne
Hyphomonas neptunium
Pathway
hne03030
DNA replication
hne03430
Mismatch repair
hne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNE_3559 (holA)
03430 Mismatch repair
HNE_3559 (holA)
03440 Homologous recombination
HNE_3559 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hne03032
]
HNE_3559 (holA)
03400 DNA repair and recombination proteins [BR:
hne03400
]
HNE_3559 (holA)
Enzymes [BR:
hne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNE_3559 (holA)
DNA replication proteins [BR:
hne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNE_3559 (holA)
DNA repair and recombination proteins [BR:
hne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNE_3559 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ABI76650
UniProt:
Q0BWB3
LinkDB
All DBs
Position
3694229..3695260
Genome browser
AA seq
343 aa
AA seq
DB search
MLHKGRAAEGFARRPDPEVWAVLAFSEDEGLAFDAGQALIAGWGGKPGMDVTVLDDDAIK
KEPALLFDALEAVSLLGDSRAVRVRTSGDKIAALLAEAIAAGDKDPRRFAAKLIIEAGSL
PGKSKLRAAAEGAKRAACLQFFAEEDTDVASRVKTALLAEGAVIDPPALDAFVGDLPGHR
ALANSEIEKLALYARGLGRPLNLEDVRALSATDVKQAISGAVNAALDGHPGAAQTALDKL
SENGTSGISILRSLQMEVLRMLSAHEKIAGGDGNPGKYLRPPVWPSDWPAFRVRLGKWPA
RRLMRVMERIHDAERQTKLAGPIGDPVVRLLINDLAKAAENVR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacaaggggcgcgcggccgaaggcttcgcccggcggcccgatccggaagtctgg
gccgtacttgcgttcagcgaagatgaaggcctcgccttcgatgccggccaggcgctgatc
gccggctggggcggaaaaccgggcatggatgtcaccgtgctggatgacgatgccatcaag
aaagagcccgcccttctcttcgatgcgctcgaagctgtctcgctgctgggggactcccgc
gcggttcgcgtgcgcacgagcggggacaagatcgcggctttgctggccgaagccatcgcc
gccggtgacaaggatcccaggcgttttgccgccaagctgatcatcgaagcgggcagcctt
ccgggaaagtcaaagctccgggcggcagccgaaggcgcaaagcgcgccgcctgtcttcag
ttcttcgccgaggaagacaccgatgttgcgagccgggtgaagacggccctgctcgcagag
ggcgcggttatagacccccctgccctggacgctttcgtgggcgacctgccgggacatcgc
gcactcgccaattccgagatcgagaaacttgcgctttatgccagaggcctgggacgcccg
ctaaacctggaagacgttcgggcgctgtcagcgacggatgtgaaacaggccatctccggc
gccgtgaatgcggcccttgatggtcaccccggcgcggcgcagaccgcgctcgacaagctt
tccgagaacggaacgagcggcatatcaattctgcggtccctccagatggaggttctccga
atgctcagcgcgcatgaaaagattgccggcggagacggaaatccgggaaagtaccttcgc
ccgccggtctggcccagcgactggcccgccttccgcgtgcgccttggcaagtggcccgcg
cggcgcctgatgcgcgtgatggaacgaattcatgatgccgagcgccagaccaaactggcc
ggaccaatcggggaccctgtggtccgcctgctgatcaacgatctggcaaaggccgctgaa
aacgttcgttaa
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