Hymenobacter nivis: DDQ68_21275
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Entry
DDQ68_21275 CDS
T05498
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
hnv
Hymenobacter nivis
Pathway
hnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDQ68_21275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnv03400
]
DDQ68_21275
DNA repair and recombination proteins [BR:
hnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DDQ68_21275
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DDQ68_21275
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
HHH
Phage_coat
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AWM35075
UniProt:
A0A2Z3GVN6
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Position
4787913..4788527
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AA seq
204 aa
AA seq
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MDFPSKLIENAVGELARLPGIGKKTALRLALHLLKADTDTTASLAEALAKMRFEITYCRT
CHSISDAEECSICANQLRDHAQVCVVADVRDVIAIENTGQYRGVYHVLGGVISPIEGVGP
TDLHIDSLVERAAAEDSDVREIILAISPTMEGDTTAFYLSRRLRDLPNVHISTIARGIPM
GGELEYADEITLGRSIVDRQRQVN
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggactttccttccaagctgattgaaaacgccgtgggcgagttggcccggctgcccggc
attggcaaaaaaacggctctgcgcctagcgctgcacctgctgaaggccgacaccgacact
acggcctcactggccgaggcgctggccaaaatgcgctttgaaatcacttactgccgcacc
tgccacagtatttccgacgccgaggagtgcagcatttgcgccaaccagctgcgcgaccac
gcccaggtgtgcgtggtggccgacgtgcgcgacgttattgccatcgaaaacacgggccag
taccgcggcgtgtaccacgtgcttggcggcgtcatttcgcccatcgagggcgtggggccc
accgatttgcacatcgactcgctggtggagcgggccgcggccgaagattcggacgtgcgc
gaaattattctcgccatcagccctaccatggagggcgataccaccgccttttatctctcg
cgccgcctgcgcgacctgccgaacgtgcacatcagcaccatcgcccgcggtattccgatg
ggcggcgagctggaatacgccgacgaaattacccttggccgcagcatcgtggaccgccag
cggcaggtgaactaa
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