Hemiscyllium ocellatum (epaulette shark): 132818420
Help
Entry
132818420 CDS
T09720
Symbol
gtf2a1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132818420 (gtf2a1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132818420 (gtf2a1)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
132818420 (gtf2a1)
BRITE hierarchy
Motif
Pfam:
TFIIA
DDHD
CCD97-like_C
BUD22
SRP-alpha_N
Pox_Ag35
YABBY
Nop25
Motif
Other DBs
NCBI-GeneID:
132818420
NCBI-ProteinID:
XP_060685425
LinkDB
All DBs
Position
8:complement(108840026..108904276)
Genome browser
AA seq
419 aa
AA seq
DB search
MASSANSNPVPKLYRSVIEDVINDVREQFLDDGVDEQVLIELKTLWESKLMQSKAVDGFH
SEEQQILIQAQQQQQQQQQHQQHQQQQQQQQQQQQQQQHQHQAQPQQTQQVLTIPANSVF
SSSHKSGPQVIMQDGKLIQHMNPTGMSAAATAATLALPAGVPTPYQLSNGPILTNAGQLL
QFVRAPNGAHYFFQPHQQVVLAQSVTQQQVIQQMQSGGVQAPVIQQMLAPLPPGSIPQQT
GVIIQPQQILVAGNKVPSNTQVMQATTVAATPSTQVGQTNSSAPLQQQPQQQQQQQQQQQ
QQQQQQPQPPLVVQVDGSGDTSSEEDEDDEEDEYDDEEEEKDKEEVGEDGQVEEEPLNSE
DDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYVFSKAIGDAEW
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttcggccaactcaaacccggtgcctaaactctacagatcagtaattgaagat
gtaatcaatgatgtacgagaacaattccttgatgatggagtggatgaacaagttcttata
gaattaaaaacgctatgggagagcaagctaatgcagtcaaaagctgttgacggtttccac
tcagaggagcaacagattttaattcaggcgcagcagcagcagcagcaacaacaacagcac
cagcagcaccagcagcagcagcagcaacaacaacaacagcaacagcagcagcaacatcag
catcaggctcagccgcaacagacacagcaagtgctcacaatacctgctaattcagttttc
tcatcttctcataaatcaggaccgcaagttattatgcaagatggaaaactaatacaacac
atgaatccgactggcatgagtgcagctgccactgcagcaactctggcattaccagccggt
gttccgactccctaccagctttctaatggaccaatcctaacgaatgcagggcaactgctg
cagtttgtacgagctcctaatggagcccactactttttccagccacaccagcaagttgta
cttgcacaatcggtgactcagcagcaggttattcagcagatgcagtctggtggtgtgcag
gcacctgtcatacagcagatgctggctccactgccacctggaagtatccctcagcagact
ggagtgatcattcaaccccagcaaattcttgttgcagggaacaaggttccttcaaacaca
caggttatgcaagccaccactgtagcagcaaccccttcaacacaggttggtcaaacaaac
agctccgctccccttcagcagcaaccgcagcaacaacagcagcaacaacaacagcagcaa
cagcagcaacagcaacaaccacaaccccctttagtggtgcaagtagatggctctggagac
acttcttcagaggaagatgaggacgacgaagaggatgagtatgacgatgaggaagaagaa
aaagacaaggaggaggttggggaagatggacaagttgaagaggaaccactcaacagtgag
gatgatgtcagtgatgaagagggccaagaactctttgacacagaaaatgttgttgtctgc
cagtatgataagatccaccggagtaagaataaatggaagtttcacctgaaggatgggatc
atgaacctgaatgggagagattatgtgttttccaaagccatcggagatgcagagtggtaa
DBGET
integrated database retrieval system
