Hemiscyllium ocellatum (epaulette shark): 132819797
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Entry
132819797 CDS
T09720
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132819797 (scaf8)
03041 Spliceosome [BR:
hoc03041
]
132819797 (scaf8)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132819797 (scaf8)
Spliceosome [BR:
hoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132819797 (scaf8)
BRITE hierarchy
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132819797
NCBI-ProteinID:
XP_060687554
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All DBs
Position
10:68037082..68173204
Genome browser
AA seq
1155 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISRAKMNQVTKAAIKSIKFYKHVVQSVEKFIQRCKPEYKV
PGLYVIDSIVRQSRHQFGPEKDVFAPRFCKNINTTFQNLYKCPADDKSKVVRVLNLWQKN
GVFKSEIIQPLLDLATGIPPPSVTPAVASTTAATVSSNTPGTPATPATPANVMQNLPDAW
ASISQLSNTDTIAAVAQLLQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQAL
TAQLTAAATANTLNPLEQRLNFNKKLLDRFEYEEEQDHSEETKKETSASQLPLVTETMNT
SLFQQLAEQFQQQNFEQLRQQILEQQQTQQNATLDNQEVSFGSEQSVTPSQSSTHQQQEQ
EVRVEDPLEQQQQDMDIDAPDGQDLIEEEIFQHEEKKPLVRSRSLTHSRSRSRSPRKKRS
RSRSGSRKRKHRKRSRSRSKERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCS
TTLWVGQVDKKATQQDITNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSTGS
FKMGSKIIKIAWALNKGVKPEYKQFWDVDLGVTYIPWEKLKLDDLEGFSEGGMIDQETVN
SEWESRNTEPVKENVIQPVTTESTQPTSQGETFTQAVTMLPVQIPVTPTVSAISMVQPPA
FPVSMSIPPPGFNPAIPPPPFLRHSFNPSQPPPGYLPPPPVVPPPVVGPSIPPVQTSLVC
PPLSNTQDSTKDSPFGNLLSHIGSGHSNLPTPSIPPGSMFNPIGTQPLSSGPGGSNDLGA
PRTGSQTSSSETTSTSGPGTQSTVSTGSVLGLQPSTPAPGLPNLPPPSMVGPRIPGVLPL
DVRPGMMPPSPGQRFPLLMPPQPNLPPQPNLPPQPNLPPQQSMPPSLSIDRPLHSGSRAP
FPPVSSFSRLEGAFTRSAVPSSESNTNASQGTADERRSTGNDHSFQRNSIQQEGDRDYRF
PPVDNSDSLGRRDQFGFGPDQRWGSRDFDERERRAMPFGGPKGFHDDHEAYSGRNFRFDG
RSGPVWNRSFDQETHRDLDDRSRPWERQRDRDDRDFGFRRDVNGNRFGRDREQDHWVPPR
HRFDYFQGTTDHQKPDDRPRVNGDFSETNSQTPNKELANNDPEVSVNLASPSDGSVEKDD
LENQPVTENTDTEGT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcctttaataacgagttgtactcattgaatgagtataaaccaccc
atctccagggccaaaatgaaccaggtgacaaaggcagctatcaagtctattaagttctac
aaacatgtggttcagagcgtggaaaagtttattcaaaggtgtaaaccagaatacaaagtc
ccagggctgtatgttatcgactcaattgtgcgtcagtctcgtcatcagtttggtccagaa
aaggatgtgtttgcgcccagattttgcaagaacatcaatacaactttccaaaacttgtac
aaatgtcctgctgatgacaagagtaaagtagtgcgggtactgaacttgtggcagaagaat
ggagtgttcaaaagtgagatcatacaaccacttctggacctagcaactgggattccgcca
ccatctgtcacccctgctgttgccagtacgactgcagcaactgtgagcagcaacacacca
ggaactccagccacccctgctactccagctaatgtcatgcaaaacttacctgatgcatgg
gcctccatctctcagctgtcaaacacagacacgattgctgctgttgcacagcttctgcag
agtccccagggtcaacagctccagcagttggtgcaaagtcttcagatgcagcagcaaaaa
cctcagccttctctgcttcaggctcttgatgctgggcttgtagttcaactacaggcgctt
acagcccagcttacagcagctgcaactgctaatacactcaatccactggagcaacgactc
aattttaataagaaactccttgatagattcgagtatgaagaagaacaggatcattcagag
gaaacaaagaaagaaacatctgcatcccagctacctcttgtaactgagaccatgaacaca
tcactttttcagcaactggctgagcaattccagcagcaaaacttcgagcaacttcggcaa
cagatattggagcaacagcagacacagcagaatgcaactttggacaatcaggaagtaagt
tttggatctgaacagtcagtgaccccttcccagagcagcactcatcagcaacaagagcaa
gaggtcagagtggaggatccacttgagcaacaacaacaggatatggatattgatgcacct
gatggtcaggaccttattgaagaagaaatctttcagcatgaagaaaaaaagcctttagta
cgttcaagatctctgacacactcaagatctcgttcaagatcacctcgaaagaaaagatcc
agatcccgctcagggtctcgcaagcggaaacatcggaaacgctctcgctcaagatcaaaa
gaaagaaaaaggaagtcgtctcgatcttactccagtgaaagacgagcaagggagcgtgaa
aaggaacgccaaaaaaaaggtctaccacctatccgttcgaaaacactgagtgtatgcagt
actacactgtgggttggtcaggtagacaaaaaggcaacacaacaagatataaccaatctc
tttgaggagttcggccagattgaatcaataaatatgataccacctcgaggatgtgcatac
gtttgtatggttcatcgacaagatgcttttcgtgctcttcagaaactaagcactggatcc
tttaaaatggggtctaaaattattaagattgcttgggctttaaataaaggtgtgaaacct
gaatataagcagttttgggatgtggaccttggcgttacatatattccatgggaaaaattg
aaattagatgatttggaaggcttttctgagggaggcatgatcgaccaggaaactgttaat
agtgaatgggagtctaggaacactgagcctgtaaaagagaatgtgatccaacctgtaact
actgaaagcactcaaccaacatcacaaggagagacattcacacaagctgtcactatgcta
cctgttcagatcccagtgactccaactgtttcagcgattagcatggtgcagccaccagcc
tttcctgtatcaatgtctatccctcctccaggcttcaacccagccataccgccacctcca
tttttacggcacagttttaatccttcgcaaccaccaccaggttacctaccaccaccacca
gtcgttccacctccagtcgttgggccttctattcctccagtacaaacctctctagtttgc
ccgcctctttccaacacccaagacagtacaaaggattccccgtttgggaacctactttca
cacataggctctgggcacagcaatctcccaactcctagtattccaccagggagtatgttt
aatccaattggcacacagcctctctcttctggtccaggtggatcaaatgacttaggggca
ccacgcacaggtagccaaacgtcgtcatctgaaacaacatctacttctgggccaggaact
caaagtacagtttcaactgggtcagttctgggattgcaaccatcaacacctgcaccagga
ctacccaatttgccacctccaagtatggttggaccaaggatacctggagtactcccattg
gacgtgcgtcccgggatgatgccaccatcgccaggacagcggtttccattgctgatgccc
cctcagccgaacctaccccctcagccgaacctgccccctcaaccgaacctgccccctcag
caaagcatgcctccttcgttatcaattgacagacctcttcactcagggtccagagctccc
tttccaccagtaagttctttcagtaggcttgaaggagcatttacaagatctgcagttccc
agttctgagagcaatactaatgcaagccaaggtactgcagatgaaagaagatctactgga
aatgatcattcttttcagcgaaacagcatacaacaagaaggtgatcgggattatcgcttc
ccaccagtggataacagtgacagtcttggaagacgtgatcaatttggatttggtcctgac
caaagatggggctcgagagattttgatgaacgtgagcgtcgtgccatgccctttggtggt
cctaaaggttttcatgatgatcatgaagcatatagtggaagaaatttcaggtttgatgga
agaagtggtccggtatggaaccggagttttgaccaggaaacccatagggatcttgatgat
cgcagtaggccttgggaacgccagagagatcgtgatgaccgagattttggctttcggcgg
gatgtaaatggaaaccgttttggaagagacagagagcaagatcactgggttcctcctcgg
cataggtttgactattttcaagggaccactgatcaccaaaaacctgatgataggcctcgg
gtaaatggtgacttctcagaaacaaacagccagacaccaaacaaggagctcgcaaacaat
gaccctgaagtgtctgtgaaccttgcatctccatcagatggaagtgtggagaaggatgac
ttagaaaatcaacctgtaaccgaaaacacagataccgaggggacataa
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