Hemiscyllium ocellatum (epaulette shark): 132831025
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Entry
132831025 CDS
T09720
Symbol
cntnap1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132831025 (cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
132831025 (cntnap1)
Domain-containing proteins not elsewhere classified [BR:
hoc04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
132831025 (cntnap1)
BRITE hierarchy
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Syndecan
hEGF
ATP1G1_PLM_MAT8
Motif
Other DBs
NCBI-GeneID:
132831025
NCBI-ProteinID:
XP_060705040
LinkDB
All DBs
Position
32:complement(51415454..51489674)
Genome browser
AA seq
1303 aa
AA seq
DB search
MDPGPRALFPALLLLSAISCSAEQCNEPLVAQEYSSSMTASSYYSYSYSPSYGKLHSRGG
WSPQVSDRLPWLQINLSQRSKITAIATQGTYNSYDWVTKYIFLYGDRPDNWTPFYQQGHN
WTFAGNRNSDDVVRHELWRPVLARSVRFVALGWSVNRYVGLRVEVYGCHYDSDMVSFDGN
SSLSYQFQDENTRSLFDSISFNFKTMAQDGLLLHSEGEEGDYITVELQGAKLLFHINLGS
SNIHSVSGETSITLGSLLDDQHWHMVLIERYGQDINITLDGHVERLFTNGDFDHLDLNSL
IVFGGLNTTETLRLVDKPNFQGCMENIMYNNISIIDLARARYSQTQTLGDVRFHCREFLY
KDRPFYPLTFATQASFIQVPGIPMQNQLSVNFSFRSLDTSGLLLFSNFSEGLGWLEMGLS
EGQINISFQQTGKKRLEFAAGSNLTDGHWHSVQLLARMDSVVVVIDEREDSPIRINHALR
VQTGDQYYFGGCPTSVRNLGCFSNVSMFHGCMQHIHVDNYRVDLELVKRRKLGRYAEMLF
NTCGVADRCTPNLCEHGGICLQTSDDFVCDCERTGYTGPTCHNSFYPESCDGYRKLGVRT
SGNYTIDPDGSGPSRPFTVHCRMTEHKAWTIVYHQQQQEVKVTGSTLDQPFVGQIKYYNN
TEEEISAITLAAEYCEQSISFSCYRSRLLNSPSGLPFSWWLGRGFEKHFYWGGATPGSQR
CACGMEKSCTDPKYFCNCDADYRQWKTDRGLLRYREDLPVTKVVVGDTNRSGSEARFTVG
PLRCYGDGGSWNMASFVSGNYLQFPSFNPGPSADISLYFKTTSSHGVFLENSGYRNFIRL
ELKSEKVVAFYFDVGDGPEELQVESETLLNDDAWHFLEAEINVKFARLRLDESPWRLREA
PPQSYVSLELDRPLFVGAAEYRLNAFFGCLRGLRMNGEILNLEREANITEGVNAGCVGEC
NSTGVLCQNGGRCIERYSTYSCDCNSSAFDGMYCHKVIGGYFEPGTYVRYGFQTPFTAAA
GAFANMMVPLSHSFNSTSEEIIFSFKTSQTPSVLMYISSFSRDYLAVIIKHDGSLVLRYQ
LGSFPNPYTRILVKENVADDKAHWVNITRRDRDIYTQVDDRPIVRDKISLWGDKKFDSPR
SLFLGRVMEIGVLDPEIQRFNSPGFTGCLAGVNFNGIAPLKAALRTNTNQTVEVLGELVE
SNCGAVPIILSSVLLDEDPWAPQPGTPLFGYDYLTGAIIGVIVAVILFVILALLVLLFLY
YYRHKGSYLTNEAKPLEPSNGAKPVSLKKDQNLPQILEETKTE
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggtccccgagcgctgttcccggcgcttctcctcctgagcgcgatctcctgc
tcagccgagcaatgtaatgaaccccttgtggctcaagaatactcgagctccatgacggcc
tcctcctattactcatattcctactcgcccagctacggaaaactgcactcgagaggtggc
tggtctccccaggtttcagaccgactcccttggctccagattaacttgtcgcagagatca
aaaatcactgcaatcgccacacaaggaacatacaattcttatgattgggtgactaagtac
atcttcttgtatggtgaccggccagacaactggacaccattctatcagcagggacataac
tggacttttgcaggaaaccggaattctgatgatgtggttcgacatgagctatggagaccg
gttctcgcacgctctgtccgctttgtggccctgggctggagcgtcaatcgttacgttggg
cttcgggtcgaagtctacggctgtcattatgattctgacatggtctctttcgatgggaac
agttctctgagctaccaattccaggatgaaaatactcgctcactcttcgactccatctca
ttcaacttcaaaaccatggctcaggacggacttctcctacacagtgagggtgaagaggga
gattatatcacggtggagctccagggagcaaagcttctgtttcacattaatttaggcagc
agcaatatccattcagtcagtggagagacttccatcacattgggcagtttactcgatgac
cagcactggcacatggtcctcattgagcgctatggacaggacattaatatcactctcgat
ggtcatgttgaacgtcttttcacaaatggtgactttgatcacctagatttgaattctctg
attgtttttggtggattgaataccacagagacactgagactggtcgacaagccaaacttc
cagggctgtatggagaacattatgtacaacaacatcagtatcatcgacctggcgagagca
agatattcacaaacacagacgctgggtgatgtacgttttcactgccgtgaattcctgtac
aaggataggccattctaccccttaaccttcgcaacgcaagccagctttatccaagtacca
ggaataccaatgcagaaccagctatctgtcaacttcagtttccgatctttagacacaagt
ggtctgcttcttttcagcaacttttctgagggtcttggctggctggagatgggtttaagt
gaaggacaaatcaacatctcattccaacaaactggcaagaaaagactggagtttgctgca
ggttcgaacttgactgatggacactggcactcagttcagctgctggcccgaatggattct
gttgttgttgtcattgatgagagggaggattcaccgatacggatcaaccatgctttacgg
gtgcagactggtgatcagtactactttggaggctgccccacaagtgtaaggaacttgggg
tgtttttcaaatgtgagtatgttccacggctgcatgcaacacatccatgtggacaattat
cgtgtggacctggagctagtaaaaagacgcaaactaggaagatatgcagagatgctattt
aacacgtgtggagttgcagatagatgtaccccaaatttgtgtgaacatggaggaatttgt
ctgcagacttcagatgattttgtgtgtgattgtgagagaacaggatacacaggcccaacc
tgtcataactccttctatcctgagtcatgtgatgggtacagaaaactgggcgtgcgaaca
tctggaaactacactattgaccctgatgggagtggtccttccagaccctttactgttcac
tgcagaatgacagaacataaagcctggacaattgtttaccaccaacagcagcaagaggtc
aaagtaactggttcgactttagatcagccttttgtgggacagatcaaatattacaacaac
acagaggaagagatttctgcaataactctagcagctgagtattgtgaacagagtatctcc
ttctcctgctataggtcccgcctcctcaacagtccatctgggctgcctttctcctggtgg
ctgggccgtggatttgagaaacatttctattggggaggtgcgactcctgggagtcaaaga
tgtgcctgtgggatggagaagagctgcactgaccccaagtatttctgtaattgtgatgca
gactacagacagtggaagactgaccgaggtttgctcaggtacagggaggacctaccagtc
acaaaagttgttgttggtgacacaaaccgttccggctctgaggcgcgatttactgtgggt
cctttgcgttgctatggagatggaggttcctggaacatggcctcgtttgtttcagggaat
tatcttcaatttccgagcttcaatcccgggcctagtgcagacatctcactttatttcaaa
acaacatcatcccatggtgtctttctggagaattccgggtacagaaacttcatccgcctg
gaactgaaatcagagaaggtggttgcattttactttgatgtgggtgatggcccagaggaa
ctacaggtggagtcagaaacccttctgaatgatgatgcttggcactttctggaggcagag
atcaatgtgaaatttgcccgtctacggctggatgagtcaccatggcgactgagagaggcc
ccaccacaaagctatgtatccctagagctggacaggccactgtttgtgggagctgccgag
tatcggctgaatgcattttttggctgcctgcgtggtctccgaatgaatggagaaatcttg
aacctggagcgggaagctaacattacagagggagtgaatgcaggctgtgtgggagagtgc
aacagtactggggtgctgtgtcagaacggaggcagatgcattgagcgatacagcacatac
agctgtgactgtaattccagcgcctttgatgggatgtactgccataaagttattggtggg
tattttgaaccaggaacctatgttcgttacggtttccagacaccgttcacagcagcagca
ggagcatttgcaaatatgatggttccactcagtcacagttttaactcgaccagtgaggaa
attatcttcagtttcaagacgtcacagacaccaagtgtcctcatgtacatcagctccttc
tccagagattatcttgctgtgatcatcaaacatgatgggagcttggtgcttcggtaccag
ctcggctccttccccaacccatacaccaggatcctggtcaaggaaaatgtggctgacgac
aaagctcattgggtcaacatcacccggcgagaccgggacatctacacacaggtggatgac
cgtccgattgtccgcgacaagatttctctctggggcgataagaaatttgattcgccgagg
tccctcttcctgggtcgagtgatggagataggtgttctggatcctgagatccagcggttt
aacagtccaggtttcactgggtgcttggctggagtcaacttcaatggaattgccccatta
aaggcagccctgagaacaaacaccaaccaaactgtggaggttttgggggagttggtggaa
tcaaactgtggggctgtccccataattctatcgtcagtccttctggatgaagatccttgg
gctccgcaaccaggcactccactatttggatacgattacctgactggagctatcattgga
gtcattgtagcagtcatcctcttcgttatcctcgcgctattggtcttgctgttcctctac
tattaccgacacaagggcagctacctcaccaatgaggccaaacccctggaaccttccaat
ggggccaaacctgtctctctgaagaaagaccaaaaccttccgcagatactggaagagact
aaaactgaataa
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