Hemiscyllium ocellatum (epaulette shark): 132836699
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Entry
132836699 CDS
T09720
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132836699 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132836699 (exosc5)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132836699 (exosc5)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132836699
NCBI-ProteinID:
XP_060712086
LinkDB
All DBs
Position
47:complement(12804677..12827802)
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AA seq
220 aa
AA seq
DB search
MEAGAESQQQLRPFGSEHSLLSRPDGSACFTQGDTTVLAAVYGPAEVKVSKEIFDKATLD
VLLKPKVGLPSVSEKSKEQMIRNTCEATILTALHPRSSITVVLQVIHDSGSLLACCLNAA
CMALMDAGLPMKSVFCGVTCVIDSDGAILLDPTTKMEKEAAAVLTFSIDSVEKQLLMSST
KGLYSVEELQQCVAMCQKAAEKIFQFYRDSVSRKYSKMSD
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggtgctgagagccagcagcaattgaggccttttggcagtgaacacagtctc
ctgtccaggcctgatggctcggcttgcttcacacaaggggacacgaccgtcctggctgca
gtgtatgggccggcagaggtgaaagtcagcaaagaaatcttcgataaggccacgctagat
gtcctcctgaagccaaaagttggattgccgagtgtctctgagaagagcaaggagcagatg
attcgaaacacgtgcgaagccaccatcctgactgctctccatccgcgctcctctatcaca
gtcgtgctgcaagtcatccatgactctggatctctgttggcttgctgcctgaatgcagcc
tgcatggcactaatggatgctgggctgccgatgaaaagtgttttctgcggggtcacgtgt
gtgattgactccgacggagccatcctcttagatccaacaacaaaaatggagaaggaggct
gctgcagttctgacgttttccatcgacagtgttgagaagcaattgctgatgtcgtccaca
aaagggttatactctgttgaagagctccaacagtgtgtcgcaatgtgccagaaagctgca
gagaaaatcttccaattctacagggattcggtgagcaggaaatactcgaaaatgagtgac
tag
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