Hemiscyllium ocellatum (epaulette shark): 132837001
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Entry
132837001 CDS
T09720
Symbol
sim1a
Name
(RefSeq) single-minded homolog 1-A
KO
K09100
single-minded
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132837001 (sim1a)
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132837001 (sim1a)
BRITE hierarchy
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Latexin_N
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
132837001
NCBI-ProteinID:
XP_060712616
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All DBs
Position
3:39003312..39085646
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AA seq
771 aa
AA seq
DB search
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
GEAWGQTSRTGHLDNVSRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFVRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDAEYKGLQLSLDQVTATKPSFSYANST
PTITDSRKTSKSRLSRTKSKPRTSPYPQYSGFHKERSESDHESQWGGSPLTDNASPQLLG
HTEGSQPSQHDIISCAYGQFSDRNSLCYGFALEHSRSVEERQSHFHTSPCEAGRCEAGRY
FLGGSQSGRENWWNSSRMTLALTKSSPESREGYENSMPHIASIPSIHGRGHWDEDSVVSS
PDPCSASESGDRYHNERYQSSPHEPSKIETLIRATQQMIKEEESRLQMRKTTSDQLPPMN
GVGKLHAACFNVSYQQQQMTSVVCRAPPMSNISRCDHLQQRDGKIVSPHENEYNGSPISL
SRISSPSSDRVSKTNVALNKDYLASDMSPHQTGGNCASSPNYYSTHPRQYFDKHAYALTG
YAFEHLYDSEAIKNYSLGCNGTHIDVTSHFRMQQDPTHVHKSTTVIITNGS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaagtccaaaaatgctgcccggactagacgggagaaggaaaacagcgagttt
tacgaactggccaaattactgccactgccatctgcaataacctcccagctcgacaaagcc
tccatcatcagactgacaaccagttatttaaagatgagagtggttttccctgaaggactc
ggagaggcctgggggcagaccagtcgcactggtcacttggataacgtcagccgagaactg
gggtctcacctgttacagaccctggacggctttattttcgtggtggctccggatgggaaa
attatgtacatctctgagaccgcgtcagttcatttgggactgtcacaggtagagctgact
gggaacagtatttatgagtacatccaccctgctgatcatgacgaaatgactgcagttctg
acagctcatcagccctaccactctcactttgttcaagaatatgaaattgaacggtccttc
tttgtgaggatgaaatgtgtcttggcaaagaggaatgctggtttaacctgtggtggttac
aaggttatccattgcagtggctatctaaagattcgtcagtacagtctagacatgtctccc
tttgatggttgttaccagaatgttggattagtggcagttggccattcactgcccccaagt
gctgtgacagaaatcaaactgcacagcaatatgttcatgtttcgagctagccttgacatg
aaactgatatttcttgactccagggtagctgaactgacaggctatgaacctcaggattta
atagaaaaaactctctatcatcatgtccatggatgtgatacatttcacttgcgctgtgct
catcatttgttgcttgtcaaaggacaggtaacaacaaaatattaccgcttccttgcaaag
catggaggttgggtatgggttcagagctacgcaacaatagtccacaatagcaggtcatct
cggccccactgcattgttagtgtcaactacgttctcacggatgctgaatacaagggattg
caactgtcacttgatcaagtaacagcaacaaaaccatccttttcatatgcaaactcaacc
ccaaccatcacggactcaaggaagacaagcaagtcccgtctcagccgaacaaaatccaag
ccaagaacatcaccgtatccacagtattctggatttcacaaagaaagatctgaatcggac
catgagagccaatggggaggaagtccactgacagataatgcttccccacaactgctgggt
cacacagaagggtcacagccttcccagcacgacattatttcctgtgcctatggacagttt
tccgacagaaattcgttgtgctacggctttgccctcgagcactccagatcggtggaggaa
aggcagtcccacttccacacatcgccgtgtgaggctggaaggtgcgaggcaggcagatac
tttcttgggggctcgcaatctggaagagagaattggtggaactcctctcgtatgacacta
gctctgactaagtcgtctccagagagcagggagggatatgaaaacagcatgccacacata
gcttctattcccagtattcatggaagaggacattgggatgaagacagcgttgtcagttca
ccagatccttgttctgccagtgaatccggggacaggtaccacaatgagaggtaccagagt
agtccacatgagccaagtaaaatcgagactctgattagagcaacacagcaaatgatcaaa
gaagaggagagcaggctgcaaatgagaaaaactacctcggatcagttgccgccgatgaat
ggtgtaggcaagctccatgctgcatgttttaatgtaagctaccaacagcaacaaatgacc
agtgttgtgtgtcgtgctccaccaatgtctaacatctctcgctgtgatcaccttcaacaa
agagatgggaaaatcgtcagccctcacgagaacgaatacaatggcagccccatttcactc
tcaagaataagtagccctagttcagatcgggtttcaaagacaaatgtagccttaaataag
gactacctagcttcagacatgtctcctcatcaaacaggggggaactgtgcatcatccccg
aactattactccacccatccccgacagtactttgataaacatgcctatgcactgactggc
tatgcttttgagcacctgtatgatagtgaagccattaaaaactattctctgggctgcaat
ggcactcacattgacgtgacctctcacttccgaatgcaacaggatccaacccatgtacac
aagagcaccacggtaattattactaatggaagctga
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