Haliangium ochraceum: Hoch_6872
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Entry
Hoch_6872 CDS
T01103
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
Organism
hoh
Haliangium ochraceum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_12
ANAPC3
TPR_6
TPR_17
TPR_11
TPR_7
TPR_20
Coatomer_E
TPR_9
TPR_4
Herpes_US9
DUF3568
Motif
Other DBs
NCBI-ProteinID:
ACY19336
UniProt:
D0LUL3
LinkDB
All DBs
Position
9408967..9413346
Genome browser
AA seq
1459 aa
AA seq
DB search
MPGKMAPPSVPVTLAPPGAKPGAKPAPPAAQGNDDIGLGGSGNEAASSAAPEPEVKAPNL
DLGAPGDADIVRPTLPPSADDVDLGHSGNEDYDDEPNEFLDLSPAAADDDLLDLGAPGSN
DAERKLARDTAATMDIGPLGIGDLDVGAADLPVSAGKRGSEGADLPAPLEDPEIFDLPAP
LEAADDDADLPAPSHVARQPSADLPAPSMRRASAELPTPAARPSLSDLPAPSARGGSDLP
APRGAGASALDLPAPAGGAELPQAAGNAIDLPGDIGLDLPASSAELPASSAELPASADDF
FGDLPQAAQDSLPTPASELPAATGELPAPTDDFFGDLPRPAGTGASPAGNRSGAGAELPA
SADDFFGDLPQTAAAPPAASQAGAELDDPLGGDDFDPLGDIGLGLGSGDADARSDFNPPD
VSKPAAPSPAGGGLDDDPFGLGDSSSPLSLSTDDGPAPAKSADDAMSLGGLELEPSREDD
PLGMASIPLDHGGASPSPAQASAEKSGIDDLGDMGLGGGDDTLGLDLGLPDPGSMAGAPA
PPPTAAKAPAPAADAGGDDFGLPSISGGGDDLGLPSIPASSEAPRAKPKAKAKPKTKPKP
ERRRPGRRGEKEPEEKLDLEDTAIPRVQQGHMAASALTERHLIRRRQRRRRIIMSVAAVL
VLAAGTGGFFVYRSWAAQQEIAANLSEQRSAALAALQAGEPDHWERAVAAADKALAVAPQ
DPDALGIAAQGAYAAIIDQGRDAERWRQAGLDYTRRIDDSSLGGAHVDKAQALKSIDQGR
PAAAISRLQQVLSRTPNDPDAVLYQGWAHAAARDNTQAAQFFEKSLELSPKRPLPALYGL
GRAQLAQGDRDSARATFAQILEQRESHLGALVGAAQAADVGGSDKREAKLLEIVNRPDAA
EGDPRELSRAWSLAAYISLDSGRIDEAGRRFEQAINAHPANVNALVGRARVALAQERYED
ATEQLTRVIGTDLNAVDPVRNLDALLTLTELAMRTDKPDEATAHLERVFAAKEQIDDRRG
LSRAYVMQGQILGADESQREAAIAAYEEALTLAGDDALESALALADLYTLLGRMEKARAV
LAPVERRAASDAAASVALGIRYMRANAWTDAETWLRKALELEPGDVDAQFQLGQVLASLE
RYDEAFEMLKSAAEAAPERSDIGLRLAIQYEKLDRDEEAAAAYEQLLSTSSPTVDTLARA
GRFYARQGQTDKAGEIGERILAIKDTAAAGHYLLGEGQFAQGEHAAARDSFRRAADIEQD
PQYLEATARAAERMELYDEAFEAYSEASRRAPEYIAPRLGRARLLIARRDFQRATEELED
LRKIAPNEASVFHYLGESLQAQEKHKEAISYFRTALGIDGRRAETHYRLGKSYIERGDER
DAASEFTTATQIARNSATPPSWLVDAYYELGYVQRALSRRGEAVRAWDAYLELVPEAEQN
ETKVKEVKRLLMGLKAQLR
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcaagatggcgccgcccagcgtcccggtgacgctggcccccccgggcgccaag
ccgggcgccaagccggctccgcccgcagctcagggcaatgacgacatcggcctgggcggc
tcgggcaacgaggccgcgagcagcgccgcgcccgaacccgaggtcaaggcgcccaacctc
gatctcggcgcccccggcgatgccgatatcgtccggccgacgctgccgcccagcgccgac
gatgtcgatctcgggcactcgggcaatgaggattacgacgacgagcccaacgagttcctc
gacctcagccccgcggccgccgacgacgacctgctcgatctcggcgccccgggctcgaac
gacgcagagcgcaagctggcccgcgacaccgccgcgaccatggatatcggcccgctcggc
atcggcgacctcgatgtcggcgctgccgatctgcccgtgagcgccggcaaacgcggcagc
gagggcgccgatctcccagccccgctcgaggatcccgagatcttcgatctgcccgcgccg
ctcgaggccgccgacgacgatgccgatctgcccgcgcccagccacgtcgcgcggcagcct
tcggccgatctgcccgcgccctccatgcgccgagcctcggccgagttgccgaccccggcc
gcgcgcccgtcgctgagcgatctgcccgcgccctctgcgcgcggcggcagcgacctcccg
gctccgcgcggcgccggcgcgagcgctctcgacctgcccgctccggccggcggcgccgag
ctgccgcaagccgcgggcaacgccatcgacctgcccggcgatatcggcctcgatctaccg
gcctcctccgccgagctgccggcctcctctgccgagctgccggcctcggccgacgacttc
ttcggcgacctgccccaggcggcccaggactccctgccgacgccggcgagcgagctgccc
gccgccaccggcgagctgcccgcgcccaccgacgacttcttcggcgacctgccccggccg
gccggcacgggtgcatcgcccgctggcaaccgctctggggccggcgctgagctgccggcc
tcggccgacgacttcttcggcgatctgccccagaccgcggccgcgcccccggccgcgagc
caggcgggcgccgagctggacgatccgctcggcggcgacgacttcgacccgctgggcgac
atcggcctgggcctgggctcgggcgacgccgacgcgcgcagcgacttcaacccgcccgac
gtgtccaagccggccgcgccctcgcccgccggtggcggcctcgacgacgatcccttcggt
ctcggcgacagcagcagcccgctgtcgctgtccaccgacgacggcccggcgcccgccaaa
tcggccgacgacgccatgtctctgggagggctcgagctcgagccctcgcgcgaagacgac
ccgctcggcatggcgtccatcccgctcgaccacggcggcgcctcgccatcacccgcgcag
gccagcgccgagaagagcggtatcgacgacctcggcgacatgggtctcggcggcggcgac
gatacccttggcctggatctcggtctgcccgatcccggcagcatggcgggcgcgccggcg
ccgcccccgaccgcggccaaagcgccggctccggcggccgacgccggcggcgacgacttc
ggtctgcccagcatcagcggcggcggcgacgacttaggtctgcccagtatcccggcctcc
tccgaggcgcccagggccaaacccaaagccaaagccaagcccaagaccaagcccaaaccc
gagcgccgtcgcccgggccggcgcggcgagaaggagccagaggagaagctcgacctcgag
gacaccgcgatcccgcgtgtccagcaggggcacatggccgcgtccgcgctcaccgagcgc
cacctgatccgccgccgccagcggcgcaggcgcatcatcatgtcggtggccgcggtcctg
gtgctggccgcgggcaccggcggcttcttcgtgtatcgcagctgggccgcgcagcaggag
atcgccgccaacctcagcgagcagcggagtgcggcgctggccgcgctgcaggcaggcgag
cccgatcactgggaacgcgccgtcgccgccgccgacaaggcgctcgcggtcgcgccccaa
gatcccgacgcgctgggcatcgcggcgcagggcgcgtacgcggctatcatcgatcagggc
cgcgacgccgagcgctggcgccaggccggtctcgactacacgcgccgcatcgacgacagc
tcgctcggcggcgctcacgtggacaaggcgcaggcgctcaaatccatcgatcagggccgc
ccggcggccgccatcagccgtctgcagcaggtgctctcgcggacgccgaacgaccccgac
gcggtgctctaccagggctgggcgcacgccgccgcgcgcgacaacacacaggccgcgcag
ttctttgaaaaatccctggagctgtccccgaagcgcccgctgccggccctctacggtctg
ggccgtgcgcagcttgcccagggcgatcgggacagcgcgcgggcgacctttgcccagatc
ctcgaacagcgcgagagtcacctgggcgcgctggtcggcgccgcccaggccgccgatgtc
ggcggcagcgacaaacgcgaggccaagctgctcgagatcgtcaaccgccccgacgcggcc
gagggcgatccccgcgagctgtcgcgggcgtggtcactggccgcctacatctcgctcgac
agcggccgcatcgacgaggccggccgacgcttcgagcaggccatcaacgcccacccggcc
aacgtcaacgccctggtcggccgggcccgcgtcgcgctcgcccaggagcgctacgaggac
gccaccgagcagctcacccgcgtgatcggtaccgatctcaacgccgtcgatccggtgcgt
aatctcgacgccctgctcaccctcaccgagctggccatgcgcaccgacaagcccgacgag
gccaccgcccatctcgagcgcgtcttcgccgccaaggagcagatcgacgaccgccgcggg
ctgtcccgggcctacgtgatgcaaggccagatcctcggcgccgacgagagtcagcgcgag
gccgcgatcgcggcctacgaggaggccctgacgctggccggcgacgacgccctggaatcg
gcgctcgcgctcgccgacctgtacaccttgctcggccgcatggagaaagcgcgcgccgtt
ctcgccccggtcgagcgccgcgccgccagcgacgccgcggcatcggtggcgctcggcatt
cgctacatgcgcgccaacgcctggaccgacgccgagacctggctgcgcaaggcgctcgag
ctcgagcccggcgacgtcgacgcgcagttccagctcggtcaggtcctggcctcgctggag
cgctacgacgaggcctttgagatgctcaagagcgcggccgaggccgctcccgagcgctcc
gatatcggcctgcgtctggccatccagtacgagaagctcgaccgcgacgaggaggccgcc
gccgcctacgagcagctcctcagcacctcctcgcccaccgtggatacgctggcgcgcgcc
ggccgcttctacgcccgccagggccagaccgacaaagccggcgagatcggcgagcgcatc
ctggccatcaaagacaccgccgccgccggccactacctgctcggcgagggccagttcgcc
cagggcgaacacgccgccgcccgcgacagcttccgccgcgccgccgacatcgagcaagac
ccccagtacctggaggccaccgcgcgcgcggccgagcgcatggagctctacgacgaggcc
ttcgaggcctactccgaagcctcgcgacgcgcgcccgagtacattgccccgcggctgggt
cgcgcgcgcctgctcatcgcccgccgcgacttccagcgcgctaccgaagaactcgaagac
ctgcgcaagatcgcgcccaacgaggccagcgtgttccactacctgggcgagagcctgcag
gcgcaggagaagcacaaagaggcgatctcgtacttccgtaccgcgctcggcatcgacggc
aggcgcgccgagacccactaccgcctcggcaagtcgtacatcgaacgcggcgacgagcgc
gacgccgccagcgagttcaccaccgccacccagatcgcccgcaacagcgcgacgccgccg
tcgtggctggtcgatgcctactacgagctgggctacgtgcagcgcgcgctgagccggcgc
ggcgaagccgtccgcgcctgggacgcgtatctcgagctggtgcccgaggccgagcagaac
gagaccaaggtcaaagaggtcaagcggctgctcatgggtctcaaggcacagctccgatag
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