Glaesserella parasuis SH03: JL26_01485
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Entry
JL26_01485 CDS
T03301
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpas
Glaesserella parasuis SH03
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpas03009
]
JL26_01485 (rluD)
Enzymes [BR:
hpas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
JL26_01485 (rluD)
Ribosome biogenesis [BR:
hpas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JL26_01485 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
CT47
NepR
Motif
Other DBs
NCBI-ProteinID:
AIK16591
LinkDB
All DBs
Position
239744..240721
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AA seq
325 aa
AA seq
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MTQQITLQTEVTSDLLGARLDQALAQLFPDYSRSRIKVWIESDLVSVNGKIVNKAREKVF
GGELIEIQAEIEEEIRFEPQNIPLNIVYEDDDILVINKPKDLVVHPGAGNPDGTVLNALL
HHYPQIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVTALQKREITREYEAVASGIMT
QGGKVDEPMARHPTKRTAMAVHPMGKSAVTHYRIMERFRNYTRLRLRLETGRTHQIRVHM
AHIAHPLLGDQLYGGRPRPPKGASGEFLEVLRNFKRQALHATMLRLHHPITGELMEWHAP
LPDDFVELIEALKADYLLYKDELDY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacaaataacattacaaactgaagtcacttcagatttattaggtgcaagatta
gatcaagctcttgcgcaacttttccccgattattctcgttcacgcattaaagtttggatc
gaaagtgatctcgtttcggtcaatggcaagattgtgaataaagctcgtgagaaagtattc
ggcggtgaattaattgaaattcaagcggaaattgaagaagaaatccgttttgaaccacaa
aatattccattaaatatcgtttatgaagatgatgatattttagtgattaataaacctaaa
gatttagtggttcaccctggggctggcaatccagatggcacggtgttaaatgccttgtta
caccattaccctcaaattgcagaagtgcctcgtgctgggattgtgcatcgtttggataaa
gataccacaggtttgatggtcgttgctaaaactgttccagctcaaactcaccttgtcact
gctttacaaaaacgtgaaattacccgtgaatatgaagctgtagcaagcggtattatgaca
caaggaggcaaagttgatgaaccaatggctcgccacccaactaagcgtaccgcaatggct
gttcacccaatggggaaatctgcggtaacacattatcgtattatggagcgtttccgtaat
tacacccgcttacgcttacgcctagaaaccgggcgtactcaccaaattcgtgttcatatg
gcacatattgcccacccattgttaggcgatcaactatatggcggtcgtcctcgtccaccc
aaaggggcaagcggtgagtttttagaggttttacgcaattttaaacgccaagcattacac
gcaacaatgcttcgcttgcatcaccctatcactggtgaactgatggaatggcacgctcca
ttacctgatgattttgttgaattaattgaggcattaaaagcggattatttgttgtataaa
gatgagttagattattaa
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