Helicobacter pylori B38: HELPY_0629
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Entry
HELPY_0629 CDS
T00950
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase (D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00470
D-Amino acid metabolism
hpb00550
Peptidoglycan biosynthesis
hpb01100
Metabolic pathways
hpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HELPY_0629 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HELPY_0629 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HELPY_0629 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
HELPY_0629 (ddlA)
Enzymes [BR:
hpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HELPY_0629 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpb01011
]
Precursor biosynthesis
Amino acid ligase
HELPY_0629 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATPgrasp_TupA
RimK
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
CAX29162
UniProt:
C7BZC1
LinkDB
All DBs
Position
complement(608934..609983)
Genome browser
AA seq
349 aa
AA seq
DB search
MIVEFCVLFGGASFEHEISVVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFA
QIKEKKLPPLILTHNGLLKNSFLGTKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIG
PRIEASVLSYNKYLTKLYAKDLGVKTLDYALLNEKNRANALDLIGFNFPFIVKPSNAGSS
LGVSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQ
EFLDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIENEVYL
NEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQIKNSYLLQIQKNK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtggagttttgcgttttatttggtggggcgagttttgagcatgagatcagcgtt
gtgagcgcgatcgcgcttaaaggagtgttaaaggataggattaaatattttattttttta
gatgaaaaccaccatttttacttgattgaagaatccaacatgcattcaaaatacttcgct
caaatcaaagaaaaaaaattaccccccctaatcctcacgcacaatggcttgcttaaaaac
tcgtttttaggcactaagataatagaattgcctttagtgatcaatctcgtgcatgggggc
gatggcgaagacgggaaattagcgagcttgttagaattttatcgtatcgcttttataggc
cctagaattgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgctaaa
gacttaggggtaaagactttggattatgcacttttgaatgaaaaaaaccgcgctaacgcc
ctggatttgattgggtttaatttccctttcattgtcaagcccagtaatgccggaagctcc
ttaggggtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacagcgcgttt
gaatattctaaagaggtcttaatagagcctttcattcagggcgtgaaagaatacaatttg
gccggctgtaagatcaaaaaggatttttgtttttcctatgtggaagagcctaacaaacaa
gaatttttagatttcaaacaaaaatatttggatttttcacgcaataaagcccctaaagcg
aatctttctaacgccctagaagaacaattaaaagagaattttaaaaaactctataacgat
ttgtttgatggtgcgatcattcgttgcgatttttttgtcatagaaaatgaagtgtatctt
aatgagatcaaccccattcctggcagtttagccaactatttgttcgatgattttaaaaca
acgctagaaaatttagcgcaatcgttacccaaaacccctaaaatccaaatcaaaaactct
tatttgttgcagatccaaaagaataaataa
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