Helicobacter pylori ELS37: HPELS_04355
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Entry
HPELS_04355 CDS
T01798
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hpe
Helicobacter pylori ELS37
Brite
KEGG Orthology (KO) [BR:
hpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpe03032
]
HPELS_04355 (gyrB)
03400 DNA repair and recombination proteins [BR:
hpe03400
]
HPELS_04355 (gyrB)
Enzymes [BR:
hpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPELS_04355 (gyrB)
DNA replication proteins [BR:
hpe03032
]
Prokaryotic type
DNA Topoisomerases
HPELS_04355 (gyrB)
DNA repair and recombination proteins [BR:
hpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPELS_04355 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFF20407
UniProt:
H8H590
LinkDB
All DBs
Position
complement(890018..892339)
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTDEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEVIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYEDGLKQFVKDSTKKELLTPIVA
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKESRPISEDIKEGLVAIVSLKMSEPLFEGQTKSKLGSSYARALVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLESEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIEKLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYTLLELEKRYNLLEILRF
LIETKDALSLDMKVLERNILEKLEGLNYQILRSFATKESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENYAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAIFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgcgatacgattaatatcact
ttgactgatgagggttcatgcatcgtagaagataacgggcgaggcattcctgtagatatc
caccccacggaaaaaatccccgcttgcaccgtggttctaacgattttgcatgcggggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgctttgagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaagtcattggcaaaaccaaaagc
gctaaagaaagcggcacgactattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaaacgcttcaaagaaatggcgtatcttaatgatggc
ttaaaaatttctttcaaagaagaaaaaacccaactgcaagagacttatttctatgaagac
ggcttgaaacaattcgtgaaagacagcactaaaaaagaattgcttacccccattgttgcg
tttaaaagcatggatgaagaaacgcgcacttctatagaggtcgctttagcgtatgctgat
gattacaatgaaaacactttaagctttgtgaataacattaaaacttctgagggcggaacg
catgaggcgggctttaaaatgggcttgtctaaggcgattttgcaatacattgacaataac
attaaaactaaagagtcgcgccccatttctgaagacattaaagagggtttagtggctatt
gtgagcttgaaaatgagcgagcctttgtttgaagggcagactaaatccaaactcggcagt
tcgtatgcgcgcgcgttggtttcaaaattagtctatgataaaatccatcagtttttagaa
gaaaaccctaacgaagctaaaatcatcgctaataaagccctactagctgcaaaggctaga
gaagccagcaagaaagccagagagcttacaaggaagaaagacaatttgagtgtcggcacc
ttgcctggaaaattagccgattgccagagtaaagaccccttagagagtgaaatcttttta
gtggagggcgatagcgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccttaaagggtaagattttaaatgtggaaaaaagccatttgtcaaagatccta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaaaattgcgctatcataaaatcattatcatgaccgatgctgatgtggatggg
agccatatccaaaccttgctgatgacttttttctatcgttatttacgcccgctgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaagggaaagacagaa
atctatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttgttaaaagtggcacgccat
taccgctacacgcttttggagttagaaaaacgctacaatttgctagaaattttacgcttt
ttgattgaaactaaggacgctttaagccttgatatgaaagttttagaaagaaacatttta
gaaaaattagagggtttgaattatcagatcttacgctcttttgctactaaagaaagcttg
catttgcatgcgcaaacccctaagggcttggtggaatttaatttagatgacaacctcttt
aaagaagtgttgtttgaagaagcaaattacacttaccaaaagcttatggaatacaatttg
gatttcctagaaaataaggatattttggcgtttttagaagaagtggaaaattacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttatgg
gaaacgaccatgcataaagaaaaccgcagcttaatcaaactcaaaattgaagatttagaa
aaaaccgatgcgatcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgccaaagatgtgaaacaactagatgtgtaa
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