KEGG   Vreelandella piezotolerans: GYM47_08855
Entry
GYM47_08855       CDS       T07036                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
hpiz  Vreelandella piezotolerans
Pathway
hpiz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hpiz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GYM47_08855 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpiz03400]
    GYM47_08855 (uvrB)
DNA repair and recombination proteins [BR:hpiz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GYM47_08855 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GYM47_08855 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 UB2H Kinesin SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: QJA24210
UniProt: A0A6H1Y742
LinkDB
Position
complement(1936476..1938500)
AA seq 674 aa
MSKEFRLQSKFQPAGDQPAAIRGLISGLESGLAHQTLLGVTGSGKTFTMANVVQQLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDDEIDSIRLFDPLTGDVRGQVPR
MTIYPKSHYVTPRETILEAIDAIKAELKERLEWLRHHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESISPQTIFVSATPGPYEAEHAGQIVEQVVRPTGLLDP
QIEVRPASSQVDDLLSEIGLRNAVGERVLVTTLTKRMAEDLTDYLDEHDIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKAILYGDRITDSMRKAIDETERRRAKQMAHNEKHGITPTTVTRSVADILEAAQ
TPGKKGNRRKGSERKVAEPSGGYDVASMNQQELLAAISKIEDAMFEAAQNLEFEEAARLR
DQLHQMKEKQLALG
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgagcaaggaatttcgtctgcagtcaaaatttcagcctgcgggcgatcagcctgcggcc
atccgcgggttgattagcggtttggaatccgggcttgcccatcagacgctgcttggtgtc
accggttcgggtaaaaccttcactatggccaacgtggttcagcagttgcaacgacccacg
atcgtcatggcgcccaacaaaacgctagcagcccagctttacggggagttcaagtcgttc
tttcctgataacgccgtcgagtacttcgtttcgtattacgactactaccagccagaggcc
tacgtgccttcttcagatacgttcatcgagaaagacgcttcgatcaatgaccatatcgag
cagatgcgcttgtccgctactaaagccctgttagagcgtcgggatgcgctgatcgtcgtt
tccgtatcggcgatctatggtttgggggaccccgatcagtacttgaagatgcgtcttcat
tttacacgcggtgaactgatcgatcagcgtgcgtttttgcgccgtttggccgagcttcag
tacacccgtaatgatatggatttccgtcgcggtacctaccgcgtgcggggcgatgtcatc
gatatttttccagcggactcggacgaagaggcggtgcgcgtcgagctgttcgacgacgaa
atcgactctattcgtttgtttgacccgctgaccggcgatgttcgtggtcaagtacctcgc
atgacgatctacccgaagtcccactacgtgacgccccgagaaaccattcttgaagctatc
gacgccatcaaagccgagctcaaagagcgcttggagtggctgcgtcatcacgagcgtctg
gtagaggctcagcggctagagcagcgaacgctctacgacatcgagatgatgctcgaattg
ggctactgcaacgggattgaaaactactcgcgctacctctcaggccgtgctcctggcgag
ccgcctcccacgtttttcgactacttgccggatgatgcgctgctgtttatcgacgagtca
cacgtcagcgtgcctcaagtgggagggatgtacaaaggcgaccgttcgcgtaaagaaacg
ctggtggagtatggatttcgcttgccgtccgcgttggataaccggccgatgaagttcgag
gagtgggagtcgatctcaccccaaacgattttcgtgtcggcgacacctgggccttacgag
gccgagcacgcaggtcaaatcgtcgagcaggtcgtgcgaccaacgggcttgttggatccg
cagatcgaagtgcgcccggccagttcgcaggtggacgacctgctgtcggagattggctta
cgtaacgccgttggcgagcgcgtgctggtgacaacgctgaccaagcgcatggcggaagac
ctgacggattacctcgacgagcacgatatccgggtgcgctacctgcactccgatatcgat
acggtcgagcgtgtcgagatcatccgagacctgcggctgggtaagttcgatgtcctggtg
ggtatcaacctgcttcgggaagggttggacattcctgaggtatcgctggtcgccattttg
gatgccgacaaagaaggcttcctgcgcgctgaacgctcgttgatccaaaccattggtcgt
gccgcacgcaatgccaacggcaaggcgattctgtacggtgatcgaatcaccgattccatg
cgtaaagcgatcgatgagaccgagcgacgccgtgccaaacagatggcgcataatgaaaag
catggtattacgcccacaacggtcacgcgctccgtggcggacatcctcgaagcggcccaa
acgccgggtaaaaagggcaatcgccgtaagggtagcgagcgtaaagtggctgagccatca
ggcggatacgatgtggcgtccatgaaccagcaggagcttctggccgccatcagcaagatc
gaagatgccatgttcgaagcagcgcaaaacctggagttcgaagaggctgcccggctccgc
gaccagctgcatcaaatgaaagaaaaacagctggcgctaggataa

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