Vreelandella piezotolerans: GYM47_08855
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Entry
GYM47_08855 CDS
T07036
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM47_08855 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_08855 (uvrB)
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM47_08855 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GYM47_08855 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
Kinesin
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QJA24210
UniProt:
A0A6H1Y742
LinkDB
All DBs
Position
complement(1936476..1938500)
Genome browser
AA seq
674 aa
AA seq
DB search
MSKEFRLQSKFQPAGDQPAAIRGLISGLESGLAHQTLLGVTGSGKTFTMANVVQQLQRPT
IVMAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDDEIDSIRLFDPLTGDVRGQVPR
MTIYPKSHYVTPRETILEAIDAIKAELKERLEWLRHHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESISPQTIFVSATPGPYEAEHAGQIVEQVVRPTGLLDP
QIEVRPASSQVDDLLSEIGLRNAVGERVLVTTLTKRMAEDLTDYLDEHDIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKAILYGDRITDSMRKAIDETERRRAKQMAHNEKHGITPTTVTRSVADILEAAQ
TPGKKGNRRKGSERKVAEPSGGYDVASMNQQELLAAISKIEDAMFEAAQNLEFEEAARLR
DQLHQMKEKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaatttcgtctgcagtcaaaatttcagcctgcgggcgatcagcctgcggcc
atccgcgggttgattagcggtttggaatccgggcttgcccatcagacgctgcttggtgtc
accggttcgggtaaaaccttcactatggccaacgtggttcagcagttgcaacgacccacg
atcgtcatggcgcccaacaaaacgctagcagcccagctttacggggagttcaagtcgttc
tttcctgataacgccgtcgagtacttcgtttcgtattacgactactaccagccagaggcc
tacgtgccttcttcagatacgttcatcgagaaagacgcttcgatcaatgaccatatcgag
cagatgcgcttgtccgctactaaagccctgttagagcgtcgggatgcgctgatcgtcgtt
tccgtatcggcgatctatggtttgggggaccccgatcagtacttgaagatgcgtcttcat
tttacacgcggtgaactgatcgatcagcgtgcgtttttgcgccgtttggccgagcttcag
tacacccgtaatgatatggatttccgtcgcggtacctaccgcgtgcggggcgatgtcatc
gatatttttccagcggactcggacgaagaggcggtgcgcgtcgagctgttcgacgacgaa
atcgactctattcgtttgtttgacccgctgaccggcgatgttcgtggtcaagtacctcgc
atgacgatctacccgaagtcccactacgtgacgccccgagaaaccattcttgaagctatc
gacgccatcaaagccgagctcaaagagcgcttggagtggctgcgtcatcacgagcgtctg
gtagaggctcagcggctagagcagcgaacgctctacgacatcgagatgatgctcgaattg
ggctactgcaacgggattgaaaactactcgcgctacctctcaggccgtgctcctggcgag
ccgcctcccacgtttttcgactacttgccggatgatgcgctgctgtttatcgacgagtca
cacgtcagcgtgcctcaagtgggagggatgtacaaaggcgaccgttcgcgtaaagaaacg
ctggtggagtatggatttcgcttgccgtccgcgttggataaccggccgatgaagttcgag
gagtgggagtcgatctcaccccaaacgattttcgtgtcggcgacacctgggccttacgag
gccgagcacgcaggtcaaatcgtcgagcaggtcgtgcgaccaacgggcttgttggatccg
cagatcgaagtgcgcccggccagttcgcaggtggacgacctgctgtcggagattggctta
cgtaacgccgttggcgagcgcgtgctggtgacaacgctgaccaagcgcatggcggaagac
ctgacggattacctcgacgagcacgatatccgggtgcgctacctgcactccgatatcgat
acggtcgagcgtgtcgagatcatccgagacctgcggctgggtaagttcgatgtcctggtg
ggtatcaacctgcttcgggaagggttggacattcctgaggtatcgctggtcgccattttg
gatgccgacaaagaaggcttcctgcgcgctgaacgctcgttgatccaaaccattggtcgt
gccgcacgcaatgccaacggcaaggcgattctgtacggtgatcgaatcaccgattccatg
cgtaaagcgatcgatgagaccgagcgacgccgtgccaaacagatggcgcataatgaaaag
catggtattacgcccacaacggtcacgcgctccgtggcggacatcctcgaagcggcccaa
acgccgggtaaaaagggcaatcgccgtaagggtagcgagcgtaaagtggctgagccatca
ggcggatacgatgtggcgtccatgaaccagcaggagcttctggccgccatcagcaagatc
gaagatgccatgttcgaagcagcgcaaaacctggagttcgaagaggctgcccggctccgc
gaccagctgcatcaaatgaaagaaaaacagctggcgctaggataa
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