Helicobacter pylori SJM180: HPSJM_01420
Help
Entry
HPSJM_01420 CDS
T01323
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPSJM_01420 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_01420 (xseA)
Enzymes [BR:
hpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPSJM_01420 (xseA)
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPSJM_01420 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SSB
Motif
Other DBs
NCBI-ProteinID:
ADO01880
UniProt:
E1PXY1
LinkDB
All DBs
Position
270311..271573
Genome browser
AA seq
420 aa
AA seq
DB search
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKG
NANRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPICELVCINTLMQGEGCVQSV
VESIAYADSFHDTKNAFDAIVMARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQLSTSPFLQTKTERL
NRLENALKLAYANLKLPQFGALVSKNDQAVELEALKRGDKIELNNEKARASAEILSVDRV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtattgagcgtgagcgaaatcaatgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgacgatccataaggtgagcggc
catgcgtatttttcgctcaaagacagccaatcagtcatcaaatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggt
attagcgtgtatgtcccaaggggggattatcaaatcaattgctttgaaatagaacctaaa
gatataggttcattaactttagctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgataaagaaaataaattacccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcagccgcttgggcggacatgaaaaagatcgcttccaaacgatggcca
atatgcgaattagtctgtatcaacactttaatgcaaggggaaggatgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagttttcatgatacaaaaaacgcttttgatgcgatt
gtaatggctaggggtggagggagcatggaggatttgtattctttcaatgatgaaaaaatc
gctgatgctctgtatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttagtggcggatttaagggcttctacgccttcaaacgcgatggag
attttgctccctaatagcgatgaatggttgcaaagacttgatgggtttaatgtgaaattg
caccgctcttttaaaactttgctccatcaaaaaaaggcgcatttagagcatttagcggct
tctttaaaacgattgagttttgaaaacaagcaccatttaaacgctttaaagctagagaaa
ctaaaaatcgctctagaaaataaaaccctagaatttttgcgctttaaaaaaacgctttta
gaaaaaatctctacccaactatccacaagcccttttttacaaaccaaaacagagcgctta
aacaggctagaaaacgccctcaaactcgcttacgccaatttgaaattgccccaatttggg
gcgttggtgagcaaaaatgatcaagcggtagaattagaggcattaaaaaggggcgataaa
attgaattgaataatgaaaaagccagagcgagcgctgaaattttgagcgtggatagggtg
tag
DBGET
integrated database retrieval system
