Helicobacter pylori SJM180: HPSJM_01930
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Entry
HPSJM_01930 CDS
T01323
Name
(GenBank) outer membrane protein HofB
Organism
hpm
Helicobacter pylori SJM180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP_2
Motif
Other DBs
NCBI-ProteinID:
ADO01982
UniProt:
E1PYG0
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Position
378080..379519
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AA seq
479 aa
AA seq
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MKNSTPLKNKVFCGLYVLSLSASLQAFDYKIEVLAESFSKVGFNKKKIDISRGIYPTETF
VTAVGQGNIYADFLSKGLKDQGHVLEGKVGGTLGGVAYDDTKFNQGGSVIYNYIGYWDGY
LGGKRALLDGTSIHECALGSDGKVIDSIACGNARANKIRRNYVMNNAFLEYRYKDIFAAK
GGRYQSNAPYMSGYTQGFEISAKVKDKNEGSHKLWWFSSWGRAFAYGEWIYDFYSPRTVI
KNGRTLNYGIHLVDYTYERKGVSVSPFFQFSPGTYYSPGVVVGYDSNPNFDGVGFRSETK
AYILLPVHAPLRRDTYRYAIKAGTAGQSLLIRQRFDYNEFNFGGAFYKVWKNANAYIGTT
GNPLGIDFWTNSVYDIGQALSHVVTADAVSGWVFGGGVHKKWLWGTLWRWTSGTLANEAS
VAVNVGYKISKSLTASVKLEYLGVMTHAGFTVGSYRPTPGSKALYSDRSHLMTTLSAKF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagcacgcctttaaagaataaagttttttgtgggttatatgttttaagctta
agcgcttctttgcaagcgtttgattataaaattgaagttttagcggagtccttttctaaa
gttggctttaataaaaaaaagattgatatttctagggggatttatcctacagaaaccttt
gtaaccgctgtagggcagggcaatatctatgcggattttttatccaaaggccttaaagat
caagggcatgttttagagggaaaagtcggtggcacgctaggaggggtcgcttatgatgac
actaaattcaatcaaggcggatcggttatttataactacatcggttattgggatggctat
ttagggggtaaaagagccttgctggatggcacgagtatccatgagtgcgcgcttgggtct
gatggcaaggtgattgattctatagcgtgcgggaacgctagggccaataaaatccgccgt
aattatgtgatgaataacgcttttttagaataccgctataaggatatatttgcggctaaa
ggggggcgttatcaatccaatgctccttacatgagcggttacacacaaggctttgaaatc
agcgctaaagttaaggataaaaatgagggaagccacaaattatggtggtttagctcatgg
ggtagggcgttcgcttatggggagtggatttatgatttttattctccaagaactgtgatt
aaaaacgggcgcactctaaattatggtatccatttagtggattacacttacgaaaggaaa
ggggttagcgtcagcccctttttccagttttcgcccgggacttattatagccctggggtg
gttgtaggctatgatagtaaccctaattttgatggcgtgggctttagatctgaaacaaaa
gcttatattttgctccctgtccatgcccccttaagaagggatacttatcgttacgctata
aaggctggcactgccgggcaaagcttgcttattaggcaacgatttgattacaatgaattt
aatttcgggggagcgttttataaagtgtggaaaaacgcaaacgcttacatcggcacgaca
ggaaaccctttaggcattgatttttggaccaatagcgtttatgatatagggcaagcctta
agccatgtggtaaccgctgatgccgtctctggctgggtttttggtgggggtgtgcataaa
aagtggctgtgggggactttatggcgttggactagcggcactttagccaatgaagcgagc
gtggctgttaatgtgggctataagatcagcaagagtttgacagcgagcgtgaaattagaa
tatttgggcgtgatgacgcatgcaggctttacggtagggagttacaggcccacgcccggc
tctaaagcgctttattcagacaggagccatttgatgacaacccttagcgctaaattctaa
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