Helicobacter pylori SJM180: HPSJM_03740
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Entry
HPSJM_03740 CDS
T01323
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00470
D-Amino acid metabolism
hpm00550
Peptidoglycan biosynthesis
hpm01100
Metabolic pathways
hpm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSJM_03740 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSJM_03740 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSJM_03740 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
HPSJM_03740 (ddl)
Enzymes [BR:
hpm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPSJM_03740 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
Precursor biosynthesis
Amino acid ligase
HPSJM_03740 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
RimK
ATPgrasp_TupA
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ADO02338
UniProt:
E1PZJ7
LinkDB
All DBs
Position
762214..763257
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AA seq
347 aa
AA seq
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MEFCVLFGGASFEHEISIVSAIVLKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLMLTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKTLDYILLNEKNRANALDLIGFNFPFIVKPSNAGSSLG
VNVVKEEKELNYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYIEEPNKQEF
LDFKQKYLDFSRTKAPKANLSNALEKQLKENFKKLYNDLFDGAIIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQIKNSYLLQIQKNK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggagttttgcgttttatttggtggggcgagttttgagcatgaaatcagcattgtgagc
gcgatcgtgcttaaaggggtgttaaaggataggattaaatactttatttttttagatgaa
aaccatcatttttacttgattgaagaatcgaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatgctcacgcacaatggtttgcttaaaaactcgttt
ttaggcgctaagataatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagacgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgctgagttacaacaaatatttaaccaaactttacgctaaagattta
ggggtaaagactttggattatattcttttgaatgaaaaaaaccgcgctaacgccttagat
ttgattgggtttaatttccctttcattgtgaaacccagtaacgctgggagctctttaggg
gtgaatgttgtgaaagaagaaaaagaattaaattacgctttagacagcgcgtttgaatat
tctaaagaagttttaatagagcctttcattcagggcgtgaaagaatacaatttggccggt
tgcaagatcaaaaaggatttttgtttttcctatattgaagagcccaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaccaaagcccctaaagcgaacctt
tctaacgccctagaaaaacaactaaaagagaattttaaaaaactctataacgacttgttt
gatggcgcgatcattcgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttagccaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcacaatcgttacccaaaacccctaaaatccaaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa
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