Helicobacter pylori SJM180: HPSJM_07920
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Entry
HPSJM_07920 CDS
T01323
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03030
DNA replication
hpm03430
Mismatch repair
hpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSJM_07920
03430 Mismatch repair
HPSJM_07920
03440 Homologous recombination
HPSJM_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpm03032
]
HPSJM_07920
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_07920
Enzymes [BR:
hpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSJM_07920
DNA replication proteins [BR:
hpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSJM_07920
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSJM_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADO03136
UniProt:
E1PYA1
LinkDB
All DBs
Position
complement(1603796..1604659)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFVDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSTHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARYQEISSPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagctctaatcgctcgcttaaagcatcag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatctaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttgttgatttagaaacc
accggatcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtgaaaggg
ggggaaattatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcacctatgaagacaccctaaacgccccaagcacgcatgaagct
ttgcaagaactgcggctttttttaggcaatagcgtgtttgtagcccacaacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggcatagaagtcagccacagagcctatgcggacgct
ttagcgagctataaactctttgaaatatgcctgttaaacttgcccagctacatcaaaacg
acaatggatttgattgatttttccaaatgcgctaacaccctaatcaaaagacccccaaga
gccagataccaagagatttcatcgccgttttctctttttgagaggacaaagggcttgtta
aatatcataaaagcaaccagttaa
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