Helicobacter pylori 35A: HMPREF4655_20862
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Entry
HMPREF4655_20862 CDS
T01892
Name
(GenBank) D-ala D-ala ligase N-terminal domain protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpo
Helicobacter pylori 35A
Pathway
hpo00470
D-Amino acid metabolism
hpo00550
Peptidoglycan biosynthesis
hpo01100
Metabolic pathways
hpo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF4655_20862
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF4655_20862
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF4655_20862
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
HMPREF4655_20862
Enzymes [BR:
hpo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HMPREF4655_20862
Peptidoglycan biosynthesis and degradation proteins [BR:
hpo01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF4655_20862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATPgrasp_TupA
RimK
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ADU40974
LinkDB
All DBs
Position
complement(833157..834227)
Genome browser
AA seq
356 aa
AA seq
DB search
MQSFLGSLIVEFCVLFGGASFEHEISIVSAIALKEALKDRIKYFIFLDENHHFYLIEESN
MHSKYFAQIKEKKLPPLILTRNGLLKNSFLGTKIIELPLVINLVHGGDGEDGKLASLLEF
YRIAFIGPRIEASVLSYNKYLTKLYAKDLGVKTLDYVLLNEKNRANALNLIGFNFPFIVK
PSNAGSSLGVSVVKEEKELIYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSY
IEEPNKQEFLDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGALVRCDFFV
IENEVYLNEINPIPGSLANYLFDDFKTTLENLVQSLPKTPKIPIKNSYLLQIQKNK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatcgtttttagggagtttgatcgtggaattttgcgttttatttggtggggcgagt
tttgagcatgaaatcagcattgtgagcgcgatcgcgcttaaagaagcgctaaaggatagg
attaaatattttatttttttagatgaaaaccatcatttttacttgattgaagaatccaac
atgcattcaaaatacttcgctcaaatcaaagaaaaaaaattaccccccctaatccttaca
cgcaatggcttgcttaaaaactcgtttttaggcactaagattatagaattgcctttagtg
atcaatcttgtgcatgggggcgatggcgaagatgggaaattagcgagcttgttagaattt
tatcgcatcgcttttataggccctaggattgaagcgagcgtgttgagttataacaaatat
ttaaccaagctttacgccaaagacttaggggtaaagactttagattatgttcttttgaat
gaaaaaaaccgtgctaacgccctaaatttgattggctttaattttccttttattgtcaag
cccagtaacgccgggagctctttaggggtgagcgttgtgaaagaagaaaaagaattgatt
tacgctttagacggcgcgtttgaatattctaaagaggtcttaatagagcctttcattcag
ggagtgaaagaatacaatttagccggctgcaagatcaaaaaggatttttgtttttcttat
attgaagagcctaacaaacaggaatttttagatttcaaacaaaaatatttggatttttca
cgcaataaagcccctaaagcgaatctttctaacgccctagaagaacaactgaaagaaaat
tttaaaaaactctataacgatttgtttgatggcgcgctcgtccgttgcgatttttttgtc
atagaaaatgaagtgtatcttaatgagatcaaccccattcctggcagtttagccaattat
ttgtttgatgattttaaaacaacgctagaaaatttagtgcaatcattacccaaaacccct
aaaatcccaatcaaaaactcttatttgttgcaaatccaaaagaataagtaa
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