Haemophilus parainfluenzae: PARA_05890
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Entry
PARA_05890 CDS
T01605
Name
(GenBank) methyl-directed mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
hpr
Haemophilus parainfluenzae
Pathway
hpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PARA_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpr03400
]
PARA_05890
DNA repair and recombination proteins [BR:
hpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PARA_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
CBW14696
LinkDB
All DBs
Position
complement(581288..583870)
Genome browser
AA seq
860 aa
AA seq
DB search
MNLQDNFEQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQ
SAGNPIPMAGVPYHAVEGYLAKLVQLGEPVAICEQVGDPATSKGPVERKIVRIVTPGTVS
DEALLPERQDNLIVAVYQEKEKFGLATLDMTSGRFQLCEPHSKEALQAELQRINPVELLY
CEDFAEMAIIEPYKGLRRRPIWEFELRTAISELNRQFGTKDLCAFGVEKSPLGLAAAGCL
LQYAKETQRASLPHIQSISVIQNNDNIQLDAATRRNLELTQNLAGGTENTLASVLDKCVT
PMGSRLLKRWIHQPIRQTDILLKRQKTIGEIIEQDLYHELQPYLQQVGDMERILARVALR
SARPRDLTRLRTALEQIEPIKSLIHTKTLSNLTALSAQIDDFSAQIELLQKAIIETPPLL
IRDGGVIAEGYNAELDEWRTLSAGATQYLENLEQRERESTGIDTLKIGFNAVHGYYIQIS
QGQAHKAPIHYVRRQTLKNAERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPH
LGQLQLASLALSELDVLVNLAERAETLNYVAPQFSDEIGVKIENGRHPVVEQVLKDPFIA
NPVNLNQQRHLLIITGPNMGGKSTYMRQTALITLMAYIGSFVPADSAVIGQIDRIFTRIG
ASDDLASGRSTFMVEMTEMANILHQATSQSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK
TRSLTLFATHYFELTALPEQIEGITNIHLDALEHNNTIAFMHAVQDGAASKSYGLAVAAL
AGVPQSVIKLAKQKLHQLEKLSAQNGDQQIQHLRALNQHQGELAFEAEPDALREAIEQLD
PDELSPKQALAYLYQLKKML
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaagataatttcgagcaacatacgccgatgatgcagcaatatctcaagtta
aaagcagaaaaccctgacattttgttattttatcgaatgggggatttttatgagcttttt
tatgatgatgcaaaaaaagcggcagcattgttagatatttctttaactaaacgtggacaa
tcagcaggtaatcccattcccatggcgggcgtgccttatcatgcggtagagggctattta
gcaaaattagtgcaattaggtgaacctgtggccatttgtgagcaagtgggtgatcccgcc
acatcaaaaggaccggttgagcgtaaaattgtacgaattgtgacgccaggtacggtaagt
gatgaagcacttttaccagaacgccaagataacttaattgtggcggtttatcaggaaaaa
gaaaaatttggtctagccacattagacatgacatctggacgctttcagctttgtgaacct
cattcaaaagaagccttgcaagctgaattacagcgtattaatcctgtagaattactttat
tgtgaagattttgctgaaatggccattatcgaaccttataaaggcctacgccgtcgtcca
atttgggaatttgaacttagaaccgcgatttcagaacttaatcgtcaatttggtacgaaa
gatttatgtgcatttggtgtagaaaaatcacctcttggcttggcagcagcaggctgttta
ttgcaatatgcaaaagaaacacaacgtgcttctcttccacatattcaaagcattagtgtt
attcaaaataacgataatattcaattagatgctgcaacacgccgaaatttagaactcact
caaaatcttgcgggtggcacagaaaacacgctggcttcggtattagataaatgtgttacg
ccaatgggtagccgtttattaaaacgttggattcatcaacctatccgtcaaacagacatt
ctattaaaacgccaaaaaaccattggtgaaattattgagcaagatttgtatcacgaattg
cagccttatttgcaacaagtgggcgatatggaacgtattcttgcgcgtgtagcactgcgt
tctgcacgtcctcgtgatctcacgcgtttacgcaccgcattagaacaaattgaaccgata
aaatcactgattcacacaaaaacattgtcaaatttaaccgcactttctgcacaaattgat
gatttttccgcgcaaatcgagctacttcaaaaagcaattattgaaactcctccgttatta
attcgcgatggtggagtcattgctgaaggctataatgccgaattagatgaatggcgaacc
ctttccgctggcgcaacacaatatttagaaaatttagaacaacgcgaacgagaaagtaca
ggtattgataccttaaaaattggctttaatgcggtgcatggttattacattcaaattagc
caaggacaagcccataaagcaccgattcattatgttcgtcgccaaaccttaaaaaatgcc
gaacgctacattattcctgaattaaaagaatatgaagataaggttttaaaatcaaaaggg
gctgcgcttgctttagaaaagcaactttatgatgaattatttgatttattgttgccacat
ttaggtcaattacaattagccagcttggcattgtctgaattggatgtgttagttaacctc
gcagaacgagcagaaaccttaaattatgttgcaccacaatttagtgatgaaattggcgta
aaaattgaaaatggtcgccaccctgtggtggaacaagtcttaaaagatccctttattgcc
aatcctgtgaatctcaatcagcaacgtcatttactgattattaccggtccaaatatgggt
ggtaaaagtacctatatgcgtcaaacagctttaattacgttaatggcctatataggcagt
tttgtgccagctgatagcgcggttatcgggcaaattgatcgtatttttactcgaattggt
gcctctgatgatttagcatctggccgttctacatttatggtagaaatgacagaaatggcg
aatattcttcatcaagccacttcacaaagtttagttcttattgatgaaatcggacgcggg
acgtctacttatgatggactttctttagcttgggcttgtgctgaatggttggcgaagaaa
acccgttcacttacgttatttgcgacccattattttgaactcaccgcgctgccagaacaa
attgaaggcattaccaatattcatttagatgcgttagaacataacaataccatcgccttt
atgcacgcggttcaagacggtgcagcaagtaaaagttatggtcttgctgttgcagcgctg
gctggtgtgcctcaatccgtgattaaactggcgaagcaaaaattacatcagttagaaaaa
ttgtcggcacaaaatggtgatcaacaaattcaacatttaagagcgttaaatcaacatcaa
ggtgaattggcttttgaagcggaaccggatgctttacgtgaagccattgagcagcttgat
ccagatgagttaagtccaaaacaagccttagcttatctgtatcaattgaagaaaatgctg
taa
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