Helicobacter pylori Shi470: HPSH_04955
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Entry
HPSH_04955 CDS
T00742
Name
(GenBank) alanine racemase, biosynthetic (alr)
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps00470
D-Amino acid metabolism
hps01100
Metabolic pathways
hps01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSH_04955
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPSH_04955
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hps01011
]
HPSH_04955
Enzymes [BR:
hps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HPSH_04955
Peptidoglycan biosynthesis and degradation proteins [BR:
hps01011
]
Precursor biosynthesis
Racemase
HPSH_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ACD48421
UniProt:
B2UU89
LinkDB
All DBs
Position
complement(983017..984150)
Genome browser
AA seq
377 aa
AA seq
DB search
MLKRASFVEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYL
GVATLDEALELHSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQTALKSQ
KRLKVHLKIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQ
MKAFNAFLEQLSNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMK
ETCPTILKNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGN
RIQVAINNQLAPLIGKVCMDQCFVKLNNIQAKEGDEVILFGDKSAKANDASEIAALLNTI
PYETISTLSKRLERVYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagggcgagttttgtagaagtgaataccgcttctttaaggcataattttagc
gcagtcaaaagcattgtccctaaagacgcccacatcatggcggttgtcaaggcgaacgct
tatggggtgggagccataaaagcgagcgaaattttcttacaagaaggggcacattattta
ggggtagcgaccttagatgaagctttagagttgcactctcatttttctaaaacccccatt
ttgattttaggctatagccctaattctaacgcttccatgctgattgataacgatttgagc
gctatgatttttagccttgaacaagcggaagttttttctcaaacggctttaaaatctcaa
aaacgcttaaaagtgcatctcaaaattgataccggcatgcaccgcttgggtttagagcct
aattttaaaagcatagaaatcattaaaaaaatccgcgctttaaaaggcttggaagtggaa
gggatattcacgcatttaagcaacgctgatgctaagattaaaacccatgctaaaaaccaa
atgaaagcctttaacgcttttttagagcagctttcaaatcaaaaaatagagtttcaatac
cgccatgcttacaattccgccggtatcctttctttgtgtaacgggaatgaaaatcgcttc
ttaaacctctatcgcccagggatcatgctctatggtttttacccttctaatggaatgaaa
gaaacatgcccaaccattttaaaaaatgttatcagtttaaaagctcaaatcgttcaaatc
agaagcgttaaaaaaggcgaatttattggctatggcgagcatttttacacgaatgaagaa
actttagtgggtgttttagctctagggtatgcagacgggttaatgcgcgctttaggcaat
cgcattcaagtagcgatcaataaccaattagccccccttattggcaaggtgtgcatggat
caatgctttgttaagctcaataatattcaagccaaagagggcgatgaggtcatcttgttt
ggggataaaagcgctaaggctaacgatgcaagcgaaatcgctgcgcttttaaacaccatt
ccttatgaaaccatcagcaccctatccaaacgcttggagcgcgtctatatttaa
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