Hydrogenophaga pseudoflava: HPF_06180
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Entry
HPF_06180 CDS
T06073
Symbol
cmpR3
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpse03000
]
HPF_06180 (cmpR3)
Transcription factors [BR:
hpse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HPF_06180 (cmpR3)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
SBP_bac_11
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QBM27264
UniProt:
A0A4P6X124
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Position
complement(1259975..1260916)
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AA seq
313 aa
AA seq
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MKNATFRQLRVFNEVARHLSFARAAEALHLTPPAVTMQIKELEGHVGLPLFERSGRQVAL
TTAGEYMLVYARKVLATLKDAEDTAARLKQVEAGQLTIGMVSTAKYFLPPLLAQFQHEHQ
GVEIRLEVGNREQLVKMLQGNEVDIAIMGRPPRELATRVEPFAAHPHVFVAPVDHPLMRI
GHPTVESLRPYGFILREPGSGTRAAMEKFLEKSRMEPRVVMEMGSNETIKQAVMAGMGIS
FLSLHTIGLELEHGLIAILDVEGTPIVRAWNVVHTLSKLLSPSAEAFRYFMLEHAERYLA
DKYGRHLRLQPAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgccaccttccgccagttgcgggtgttcaacgaggtcgcccgccacctcagc
ttcgcgcgcgcggccgaggccctgcacctcacgccgcccgcggtcacgatgcagatcaag
gagctggaaggccacgtcgggctgccgctgttcgagcgctcaggccgccaggtggcgctg
accacggccggcgagtacatgctggtctacgcacgcaaggtgctggccacgctcaaggac
gccgaggacaccgctgcgcgcctcaagcaggtcgaggccgggcagctgaccatcggcatg
gtgagcaccgccaagtacttcctgccgccgctgctggcgcagttccagcacgaacaccag
ggggtggaaatccggctggaggtgggcaaccgcgagcagttggtgaagatgctgcagggc
aacgaggtggacatcgccatcatgggccgcccgccccgcgaactggccacgcgcgtcgag
cccttcgcggcccacccgcatgtgttcgtggcgccggtggaccacccgctgatgcgcatc
ggccaccccacggtggagagcctgcggccctacggcttcatcctgcgcgaaccgggttcg
ggcacgcgggcggcgatggagaagttcctggagaagtcgcgcatggagccgcgcgtggtg
atggagatgggcagcaacgagaccatcaagcaggcggtgatggccggcatgggcatcagc
ttcctctcgctgcacaccatcggactcgaactcgaacacggcctgatcgccatcctcgac
gtggagggcacgcccatcgtgcgcgcctggaacgtggtgcacacgctgtccaagctgctc
tcaccctcggccgaggccttccgctacttcatgctcgaacacgccgagcgctacctggcc
gacaagtacggccgccacctgcggctgcagccggccggctga
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