Hydrogenophaga pseudoflava: HPF_21685 Help Entry HPF_21685         CDS       T06073                                  Symbol rpoN Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism hpse  Hydrogenophaga pseudoflava Pathway hpse02020   Two-component system hpse02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hpse00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HPF_21685 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HPF_21685 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hpse03021]     HPF_21685 (rpoN) Transcription machinery [BR:hpse03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HPF_21685 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR HTH_5 HTH_23 DUF3489 Motif Other DBs NCBI-ProteinID:  QBM30312 UniProt:  A0A4P6X187 LinkDB All DBs Position complement(4532210..4533829) Genome browser AA seq 539 aa AA seqDB search MKQGLSLRVSQHLALTPQLQQSIRLLQLSTLEMAQEVEQMLDENPFLERGEEVADREDFG VQTADAPVVAGEQLEEAAQPVVELRSAEPDTRTTQADSADNSSDDVESRLDGAAPVEESW EGDGTVEMAPDDSEWGGDAPARNSGSGGDDDDTATAADLARVPVSLQDQLHEQARCLRLS DEDSAALFFLIESLNDDGYLEDSLHELARACWRLTAGRPADEEPRFDEVEAIEQRLGMAL QWLQQMEPTGVGARDLGECLRLQIMELRNTPAARAALAICEQPLELMAKRDIKRLCAATG HDDETVRAALALIARLEPKPGRRFVDVERNVVVPDVIVTRAGRGFKVSLNAEVMPRLRVH DVYANALRGRREAGGEAGHAAMQQRLQEARWFIKNIQQRFDTILRVSSAIVERQRNFFMH GELAKRPLVLREIADELGLHESTISRVTTAKYMATPFGTYELKYFFGSSLGTETGGNASS TAVRALLKQFIASEEPTKPLSDNQLSDLLKEQGIECARRTVAKYREALRIAPANLRKAL NT seq 1620 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtctgtcgctgcgggtgtcgcagcacctcgcgctgacgccgcaactgcag cagtcgatccgcctgttgcagctgtccacgctggagatggctcaggaagtcgagcagatg ctcgacgagaacccgttcctggaacggggcgaggaagtggccgatcgcgaagatttcggc gtgcagaccgcggacgcgccggtggtggccggcgagcaactggaagaagcggcgcagccg gtggtcgagctgcgcagcgccgagccggacacccgcaccacccaggccgacagcgcggac aacagcagcgacgacgtggagagccggctggacggcgccgcgccggtcgaagaaagctgg gaaggcgacggcaccgtcgagatggcgcccgacgacagcgaatggggcggcgatgcaccc gcgcgcaacagcggttccggcggggacgacgacgacaccgccacggccgccgacctggcc cgtgtgccggttagccttcaggaccagctgcacgagcaggcgcgctgcctgcgcctgtcg gacgaggacagcgcggcgctgtttttcctgatcgagtcgctcaacgacgacgggtatctg gaggacagcctgcacgagctggcgcgcgcctgctggcgcctgaccgcgggccggccggcc gacgaagagccgcgcttcgacgaagtcgaggccattgagcagcgcctgggcatggccctg cagtggctgcagcagatggagcccacgggcgtgggcgcgcgcgacctgggcgagtgcctg cggctgcagatcatggagctgcgcaacacgcccgccgcccgcgcggcgctggcgatctgc gagcagccgctggagctgatggccaagcgcgacatcaagcgcctgtgtgcggccaccggg cacgacgacgagaccgtgcgcgccgcgctggcgctgatcgcccgcctggagcccaagccg ggccggcgcttcgtcgacgtcgagcgcaacgtcgtggtgcccgacgtgatcgtcacccgc gccggtcgcggtttcaaggtctcgctcaacgccgaggtgatgccgcgcctgcgcgtgcac gatgtctatgccaacgccctgcgggggcggcgcgaggccggcggcgaagcgggccacgcg gccatgcagcagcggctgcaggaagcgcgctggttcatcaagaacatccagcagcgcttc gacaccatcctgcgcgtgtcctcggccatcgtggagcgccagcgcaacttcttcatgcac ggcgaactggccaagcgcccgctggtgctgcgcgagatcgccgacgagctgggcttgcac gagtccaccatcagccgcgtgaccacggccaagtacatggccacgccgttcggcacctac gagctcaagtactttttcggctccagcctgggaacggagaccggcggcaatgcgtcgagc acggcggtgcgcgccctgctcaagcagttcatcgcgtccgaagagccgaccaagccgctg tccgacaaccagctctcggacctgctcaaggagcagggcatcgagtgcgcgcgccgcacg gtcgcgaaataccgcgaggcgctgcgcatcgcgccggcgaacctgagaaaagcgctttga

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