Helicobacter pylori v225d: HPV225_0962
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Entry
HPV225_0962 CDS
T01899
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00470
D-Amino acid metabolism
hpv01100
Metabolic pathways
hpv01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPV225_0962 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPV225_0962 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpv01011
]
HPV225_0962 (alr)
Enzymes [BR:
hpv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HPV225_0962 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpv01011
]
Precursor biosynthesis
Racemase
HPV225_0962 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
UPF0738
Motif
Other DBs
NCBI-ProteinID:
ADI35026
LinkDB
All DBs
Position
complement(954567..955700)
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AA seq
377 aa
AA seq
DB search
MLKRASFVEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYL
GVATLDEALELRSYFSKTPILILGYSPNANASMLIDNDLSAMIFSLEQAEVFSQMALKSQ
KRLKIHLKIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQ
MKAFNAFLEQLLNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMK
ETCPTILKNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGN
RIQVAINNQLAPLIGKVCMDQCFVKLNNIQAKEGDEVILFGDKSAKANDASEIAALLNTI
PYETISTLSKRLERVYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagggcgagttttgtagaagtgaatagcgcttctttaaggcataattttagc
gcagtcaaaagcatcgtccctaaagacgcccatatcatggcggttgtcaaggcgaacgct
tatggggtgggagccataaaagcgagcgaaattttcttacaagaaggggcacattatcta
ggggtagcgaccttagatgaagctttagagttgcgctcttatttttctaaaacccccatt
ttgattttaggctatagccctaatgctaacgcttccatgctgattgataacgatttgagc
gctatgatttttagccttgaacaagcggaagttttttctcaaatggctttaaaatctcaa
aaacgcttaaaaatccatctcaaaattgataccggcatgcaccgcttgggtttagagcct
aattttaaaagcatagaaatcattaaaaaaatccgtgctttaaagggcttggaagtggaa
gggatattcacgcatttaagcaacgctgacgctaagattaaaacccatgctaaaaaccaa
atgaaagcctttaacgcttttttagagcagcttttaaatcaaaaaatagagtttcaatac
cgccatgcttataattccgccggcatcctttctttgtgtaacgggaatgaaaatcgcttc
ttaaacctctatcgcccagggatcatgctctatggtttttacccttctaatggaatgaaa
gaaacatgcccaaccattttaaaaaatgttatcagtttaaaagctcaaatcgttcaaatc
agaagcgttaaaaaaggcgaatttattggctatggcgagcatttttacacgaatgaagaa
actttagtgggtgttttagctctagggtatgcggacgggttaatgcgcgctttaggcaat
cgcattcaagtagcgatcaataaccagttagccccccttattggtaaggtgtgcatggat
cagtgctttgttaaactcaataatattcaagccaaagagggcgatgaggtcatcttgttt
ggggataaaagcgctaaggctaacgatgcaagcgaaattgctgcgcttttaaacaccatt
ccttatgaaaccatcagcaccctatccaaacgcttggagcgcgtctatatttaa
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