Helicobacter pylori 2018: hp2018_0016
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Entry
hp2018_0016 CDS
T01914
Symbol
trmE1
Name
(GenBank) tRNA-5-methylaminomethyl-2-thiouridylate-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hpw
Helicobacter pylori 2018
Pathway
hpw04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
hp2018_0016 (trmE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpw03016
]
hp2018_0016 (trmE1)
Enzymes [BR:
hpw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
hp2018_0016 (trmE1)
Transfer RNA biogenesis [BR:
hpw03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
hp2018_0016 (trmE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFACT-R_2
tRNA_Me_trans
Arginosuc_synth
ThiI
QueC
Motif
Other DBs
NCBI-ProteinID:
ADZ50688
LinkDB
All DBs
Position
11765..12817
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AA seq
350 aa
AA seq
DB search
MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKL
LVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQR
PKSQRKEALNQVRKLVREVGEEARFDPILDRTQASDKKPQFLDELLLRPMSAKLLEPTFM
EKKGFVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
MVFEDGVIVKVGRYFVLPHNARLVVARNEEENNKLDIQHPLMDKIELLGCKGPLSLVDKN
ASKEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKESAREYLFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataaaagctttagccttatttagtggggggttggatagtttgttgtccatg
aaattactcattgatcaaggcattgaggtaaccgctttgcacttcaatatagggtttggg
gggaataaagataaaagagagtattttgaaaacgccaccgcgcaaatcggggctaaactc
ctagtgtgcgatattagagagcagttttttaacgatgtgttgttcaagcccaaatacggc
tatgggaaatatttcaacccttgcattgattgccatgccaacatgtttaggaacgcgttt
tataaaatgcttgaattggatgcggattttgttttgagcggggaagtgctagggcaacgc
cctaaatcccaaaggaaagaagcgctcaatcaggtgaggaaactggtcagagaagtgggc
gaagaggctcgttttgatcccattttagaccgaacgcaagcaagcgataaaaagcctcaa
tttttagacgaattgctcttaaggcccatgagcgctaaactcttagagcctacttttatg
gaaaaaaagggttttgttgatagggaaaagcttttagatgtgagcggtagggggcgcgct
aggcaattgcaaatgatcaaagattacggcttgaaatattatgaaaagccgggtgggggg
tgcttgcttacggacattcaagtgagcaataagattaagaatttgaaagaatacagagaa
atggtgtttgaagatggcgtgatcgttaaagttgggcgttattttgtcttaccccataac
gctcgtttggtggtggcaaggaatgaagaagaaaacaataaattggatattcaacacccc
ttaatggataagattgaattgctaggctgtaaaggccctttgagtttggtggataaaaac
gctagcaaagaagataaagaattggccggccgtatcgctttaggctatgccaagacttta
aaaaatcaagcttatctcattcaaatagggaatgaaaaacgcgagctttaccctttggat
aaagagagcgctagagagtatttattcgcttaa
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integrated database retrieval system
