Haloplanus rallus: EI982_08840
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Entry
EI982_08840 CDS
T06334
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hra
Haloplanus rallus
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hra03400
]
EI982_08840
DNA repair and recombination proteins [BR:
hra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EI982_08840
Archaeal homologous recombinant proteins
EI982_08840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
AAA_27
AAA_13
zf-C4H2
AAA_29
TMF_TATA_bd
Mod_r
COG6_N
TPR_MLP1_2
Baculo_PEP_C
ABC_tran
FlaC_arch
ATG14
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
QGX94885
UniProt:
A0A6B9F3A0
LinkDB
All DBs
Position
complement(1464301..1466967)
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AA seq
888 aa
AA seq
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MRFDRIRLRNFRPYADADLDLRDGVTVIHGLNGSGKSSLLEACFFALYGSKALEGTLDEV
VRNGETEAEIDLWFTHDDAAYHVHRRLRQSGDRTSTADCTLDGPDVTVEGARDVRGFVAD
LLRMDAEAFVNCAYVRQGEVNQLINASPDQRRDVIDDLLQLGRLEEYRERAATARLGVED
VRSGKRGELEKVESQIEAKEDRNLHARLDDLEGELADVTERIEHYERQREKAERTRSEAT
AILEEHEAKRERLDAIEGDIADLETAITEAEDERESIRESIREARERIADLEADLEERRD
AAGLDEATASAVERRRAELDDSEESIREAKSEANASATGLRNQATNLAEKADDLADRADR
AEKRAAELREAAEAATNAATDHEERIEDLDAEATDLRARFEDAPVDRGEAADRRSALRDR
RAELRERIAELEAKREAAAERVAEAEELLAAGKCPECGQPVEESPHADRIETDRERVAEL
DAELESARERVAELDDRIEILSDLAEAETRLDELAEERERLAERAAEKRDEAADRREEAE
EHESEAADLRERAEETREVAAEKREEAAEAEERVEESTAELEALAETRAAVDAVASRLDR
IADHEDEIERLRGEAERIEETNDERRERLAEKRERRDELREAVDGEAIEAARENKEKAEE
YLAEVDEELDRLASTRDDLQTKIGGVRNELDALESLRAERDALAERVAALDDLHAEAERL
EAMYGDLRAELRQRNVETLERLLNETFDLVYGNDAYAHLRLDGDYELSVVQKDGSELDPA
QLSGGERALFNLSLRCAIYRLLAEGIDGAAPMPPLILDEPTVFLDAGHVSRLVDLVEEMR
EMGVAQIVIVSHDEELVGAADDLVRVEKDPRTNRSTVSRSHPAAIPEE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttcgatcggatccgcctgcggaacttccgtccctacgccgacgctgacctcgac
ctccgggacggcgtgacggtgatccacgggctcaacggaagcgggaagtcgtcgttgctg
gaggcgtgtttcttcgcgctctacgggtccaaggcgctggaggggacgctcgacgaggtg
gtgcgaaacggggagacggaggccgaaatcgacctgtggttcacccacgacgacgccgcg
taccacgtccaccgtcgactccggcagtccggcgaccggacctcgacggcggactgtacc
ctcgacggccccgacgtgaccgtcgagggcgcacgcgacgtccgcgggttcgtcgccgac
ctgctccgcatggacgccgaggcgttcgtcaactgcgcgtacgtccggcagggcgaggtg
aatcagctcatcaacgcctcccccgaccagcgacgggacgtcatcgacgacctcctgcaa
ctggggcggctggaggagtaccgggagcgcgccgcgaccgcccgcttgggcgtcgaggac
gtccgctcgggcaagcggggtgaactcgagaaggtggagtcacagatcgaagcgaaggag
gaccggaacctccacgcccgtctcgacgacctggagggcgagctcgccgacgtgaccgag
cggatcgaacactacgagcgacagcgcgagaaggccgagcggacgagaagcgaggcgact
gcgatcctcgaggaacacgaggcaaagcgggagcgactcgacgccatcgagggcgacatc
gcggacctcgagacggcgatcacggaggccgaggacgaacgcgagtcgatccgggagtcg
atccgcgaggcgcgcgaacggatcgccgacctcgaagccgacctcgaggagcgccgcgac
gccgcggggctcgacgaggcgacggcgtcggcggtcgaacgtcggcgggcggaactggac
gatagcgaggagtcgatccgcgaggccaagagcgaggcgaacgcgtcggcgacggggctg
cgaaaccaggcgacgaacctcgcggagaaggccgacgacttggccgaccgagccgaccgc
gccgagaagcgggccgcggagctacgcgaggcggcggaggcggccacgaatgcggccacg
gaccacgaggaacggatcgaggacctcgacgcggaggcgaccgacctgcgcgcccggttc
gaggacgcgccggtcgatcgaggtgaggccgccgaccgacggtcggcgctccgtgaccgc
cgcgcggagctccgggagcggatcgcggaactcgaggccaaacgcgaggcggccgcggag
cgggtcgccgaggcggaggaactactggcggccggcaagtgtcccgagtgtggacagccg
gtcgaggagtcgccacacgccgatcggatcgagacggaccgcgaacgggtcgcggagctg
gacgcggaactggagtccgcccgcgaacgggtcgcggagctcgacgaccggatcgagatc
ctctccgatctcgccgaggccgaaacgcgcctcgacgaactcgccgaggagcgcgaacgc
ctcgccgagcgggcggccgagaagcgggacgaggcggcggaccgacgggaggaggccgag
gagcacgagtcggaggcggccgacctgcgcgagcgggcggaagagactcgggaggtcgcg
gccgagaaacgcgaggaggccgccgaggccgaggaacgcgtcgaggagtcgaccgccgaa
ctggaggccctcgccgagacgcgggcggcggtcgacgccgtggcgtcgcggctggaccgt
atcgcggaccacgaggacgagatcgagcgcctgcgcggcgaggcggagcggatcgaggag
acgaacgacgagcgtcgggaacggctggccgagaagcgggagcgccgcgacgagttgcgc
gaggcggtcgacggggaggccatcgaggcggcccgggagaacaaggagaaagccgaggag
tacctcgcggaggtcgacgaggaactcgatcggctggcgtcgacccgcgacgacctgcag
acgaagatcggtggggtgcggaacgaactcgacgcgctggagtcgctccgagcggagcgc
gacgccctcgccgagcgggtggcagccctggacgacctccacgcggaggccgaacggctg
gaagccatgtacggcgacctgcgggcggagctccgccagcggaacgtcgagacgctggaa
cgcctcctgaacgagacgttcgacctcgtctacggcaacgacgcctacgcgcacctgcgg
ctcgacggcgactacgaactctcggtggtccagaaggacgggagcgaactcgaccccgcc
cagctgtcgggcggcgagcgtgcgctgttcaacctcagcctccggtgtgccatctaccga
ctgctggccgagggcatcgacggcgcggcgccgatgccgccgctcatcctcgacgaaccg
acggtcttcctcgatgcgggccacgtctcgcggttggtcgacctcgtcgaggagatgcgc
gagatgggcgtggctcagatcgtgatcgtcagccacgacgaggaactcgtcggcgccgcc
gacgacctcgtccgggtcgagaaggacccccggaccaaccggtcgacggtgtcgcggtcg
catccggccgccatccccgaggagtga
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