Herbaspirillum rubrisubalbicans: Hrubri_0901
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Entry
Hrubri_0901 CDS
T04238
Name
(GenBank) ABC transporter periplasmic sugar-binding protein
KO
K17205
putative xylitol transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_0901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_0901
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative xylitol transporter
Hrubri_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
YflT
Motif
Other DBs
NCBI-ProteinID:
ALU88117
UniProt:
A0A0U3BDV8
LinkDB
All DBs
Position
complement(1059219..1060211)
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AA seq
330 aa
AA seq
DB search
MIKKTLASLLLMAVATGVSAQNKPLRIGAAVYGLKGEFMQMWSNQLKAHPAVQDGSVQVT
VFDGNYDALTQSNQFDTMILQKYDAIIFVPIDLKAGAAPVQKAVKAGIPVIGSNTRVQGD
VLTSYVGNDDVVAGRLEAEALMKAIGGKGNIVMIEGPIGQSAQIERARGNDEVLARYKDV
KVLARKTGNWSRAESMALMENWLTAHPGQIKGVLAQNDDEALGALQAIKAKGIDPKTIAV
VGIDGIADAIAAVKRGEMVTQFQDAQAQAQGALDVALRAIKGPSYQPRSTIWAEYGDKLP
WKGGAEKSYTVPWTTITPENADAFLKKVKK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaaaccctcgccagcctgctgctcatggccgtggctaccggtgtgagcgcc
cagaacaaacccctgcgcatcggcgccgccgtctatggtctcaagggcgaattcatgcag
atgtggagcaaccagttgaaagcgcatccggcggtgcaggatggcagcgtccaggtgacc
gtgtttgacggcaactacgatgccctcacccagagcaaccagttcgatacgatgatcctg
cagaagtacgacgccatcatcttcgtgcccattgacctcaaggccggcgcggcaccggtg
cagaaggcagtcaaggccggcatcccggtgatcggctccaatactcgggtacagggtgac
gtgctgacttcctacgtgggcaacgatgatgtggtggccggtcgtctggaagcggaagcg
ctgatgaaggccatcggcggcaagggcaacatcgtcatgatcgaaggccccatcggccag
tcggcccagatcgagcgcgcacgcggcaacgatgaagtgctggcgcgctacaaggatgtg
aaggtattggcgcgcaagaccggcaactggtcgcgtgccgaatcgatggccttgatggaa
aactggctgaccgcccatcccggccagatcaagggcgtgctggcacagaacgacgatgaa
gcactgggcgcgctgcaggccatcaaggccaagggcatcgatcccaagaccattgcggtg
gtgggcatcgatggcattgccgacgccatcgcggcggtcaagcgcggcgagatggtgacc
cagttccaggatgcccaggcgcaggcacaaggcgcgctggacgtggcgctgcgcgccatc
aaggggccttcctatcagccccgttcgaccatctgggccgagtatggcgacaagctgcca
tggaagggcggtgccgaaaaatcctataccgtgccctggaccaccatcacgcccgaaaac
gccgacgccttcctgaaaaaggtcaagaaatga
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