Herbaspirillum rubrisubalbicans: Hrubri_3826
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Entry
Hrubri_3826 CDS
T04238
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid-CoA ligase protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00061
Fatty acid biosynthesis
hrb00071
Fatty acid degradation
hrb01100
Metabolic pathways
hrb01212
Fatty acid metabolism
hrb02024
Quorum sensing
Module
hrb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Hrubri_3826 (fadD)
00071 Fatty acid degradation
Hrubri_3826 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_3826 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hrb01004
]
Hrubri_3826 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrb04147
]
Hrubri_3826 (fadD)
Enzymes [BR:
hrb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Hrubri_3826 (fadD)
Lipid biosynthesis proteins [BR:
hrb01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Hrubri_3826 (fadD)
Exosome [BR:
hrb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Hrubri_3826 (fadD)
Exosomal proteins of breast cancer cells
Hrubri_3826 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ALU90983
UniProt:
A0A0U3AY38
LinkDB
All DBs
Position
complement(4499445..4501145)
Genome browser
AA seq
566 aa
AA seq
DB search
MDRFWLASYPAGVPADIDPSPYGSLVQMIDEAFVKHADRNAYVCMGKYLRYRELDAMSRA
LGAWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG
AEAIFVLENFACTLQKVVAHTQIKHIVVASMGELLGTLKGAIVNLVVRHVKKLVPAWSLP
NAISFSRALSQAQGQSLQPVLLTPDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQAEQW
LTPALKSGQPIDQLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDIAGFVKELAK
YKVNTFPAVNTLYNALLNNADFAKLDFSGYRCCVGGGMAVQKGVADKWKALTGCPIIEGY
GLSETSPIASANPCTIDDYTGTIGLPLPSTEIAILDDDGQPLPLGQPGEIAIRGPQVMPG
YWQRPDETAKVMTPDGFFKTGDIGIMDARGYTRIVDRKKDMVLVSGFNVYPNEIESVVAL
HPGVLECACVGVPDEHTGEAVKLFVVRKDKSLTTEQLMAYCKEQFTGYKKPKYIEFRDEL
PKTNVGKILRRELRDEPAKAPQKQAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacagattctggcttgcatcgtatcccgcaggcgttcccgctgacatcgaccccagc
ccctatggttcgctggtgcagatgatcgatgaagctttcgtcaaacatgccgaccgcaat
gcctacgtctgcatgggcaagtatctgcgctaccgcgagctcgatgccatgtcgcgcgca
ttgggggcctggctgcagggactgggcctgcagaagggcgcgcgcgtggcgatcatgatg
cccaatgtgctgcaataccccattgccattgccgccatcctgcgggccggctacacggtg
gtcaacgtcaacccgctctacacggcccgcgagctggaacaccagttgaaggactcgggt
gccgaagccatcttcgtgctggaaaactttgcctgcaccttgcagaaggtagtggcccat
acccagatcaagcacatcgtggtggccagcatgggcgaactgttgggcacgctcaagggc
gccatcgtcaatctggtggtgcggcacgtcaagaagctggtaccggcctggtcgctgccc
aatgccatcagcttcagccgcgcgctgtcccaggcccaaggccagagcttgcaaccggtg
ctgctgacgccggacgacatcgccttcctgcaatacaccggcggcaccaccggcgtggcc
aagggcgcggtgctgacccatcgcaacctggtggccaacgtgctgcaggccgagcaatgg
ttgactccggcgttgaagtcgggccagcctattgaccagttggtattcgtctgcgcgctg
ccgctgtatcacatctttgcgctcacggtctgcaacatgctgggcacgcgcgaaggggcg
ctcaacctgctcatccccaacccgcgtgacattgccggcttcgtcaaggagctggccaag
tacaaggtcaacaccttcccggcggtcaacacgctctataacgcgctgctcaacaatgcc
gacttcgccaagctggacttctccggctatcgctgctgcgtgggcggtggtatggcggtg
caaaagggcgtggccgacaagtggaaggcgctgaccggctgccccatcatcgaaggctat
ggcctgtcggagacctcgcccattgccagcgccaatccctgcaccatcgatgactacacc
ggcaccatcggcctgccgctgccttccaccgaaatcgccatcctggatgacgatggccag
ccgctgccgctgggccagccgggtgaaatcgccatccgtgggccgcaggtgatgccgggt
tactggcagcgccccgatgagacggccaaggtcatgacgcccgatggtttcttcaagacc
ggcgacatcggcatcatggatgcgcgtggctatacccggatcgtggatcgcaagaaggac
atggtgctggtgtccggcttcaacgtctatcccaacgagatcgaaagcgtggtggcgctg
catccgggggtgctggaatgtgcttgcgtgggcgtgcccgacgaacacaccggcgaggcg
gtcaagctcttcgtggtgcgcaaggacaagtcgctgaccaccgagcagttgatggcttat
tgcaaggaacagttcaccggctacaagaagcccaagtacatcgagttccgcgatgaactg
cccaagaccaacgtgggcaagatcctgcgccgtgaattgcgcgatgaaccggccaaagcg
ccgcagaaacaggcggcctga
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