Herbaspirillum rubrisubalbicans: Hrubri_4098
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Entry
Hrubri_4098 CDS
T04238
Symbol
cspR
Name
(GenBank) rRNA methyltransferase protein
KO
K03216
tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:
2.1.1.207
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_4098 (cspR)
Enzymes [BR:
hrb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.207 tRNA (cytidine34-2'-O)-methyltransferase
Hrubri_4098 (cspR)
Transfer RNA biogenesis [BR:
hrb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Hrubri_4098 (cspR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-ProteinID:
ALU91247
UniProt:
A0A0U3M2T3
LinkDB
All DBs
Position
4805501..4805983
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AA seq
160 aa
AA seq
DB search
MFHVVLVEPEIPPNTGNIIRLCANTGAQLHLVEPLGFPLDDAKMRRAGLDYHEYANMQVH
PDWDSFLAQRRQDPPFDARRMFAMTTHGSTPFAGLAFQPGDTFVFGSETRGLAPERRESF
PTAQRIRLPMRPGNRSINLSNTVAVVVYEAWRQNGYEGGS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
ttgttccacgtcgtcctggtcgagccggagatccctcccaataccggcaacatcatccgc
ctgtgcgccaataccggcgcccaactgcacctggtagagccgctcggcttcccgctcgat
gatgccaagatgcggcgcgccggactggactaccacgaatacgccaacatgcaggtgcat
cccgactgggatagcttcctggcccagcgccggcaagatccgccattcgatgcaaggcgc
atgttcgccatgaccacgcatggctccacgccctttgcgggcctggcgttccagccgggc
gacaccttcgtgttcggctccgagacgcgcggcctggcccccgagcggcgcgaatccttc
cccaccgcgcaacgcatccgcttgccgatgcggccgggcaatcgcagcatcaacctgtcc
aatacggtggcggtggtggtctatgaagcctggcgccagaatggctatgagggcggcagt
taa
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integrated database retrieval system
