Herbaspirillum rubrisubalbicans: Hrubri_4609
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Entry
Hrubri_4609 CDS
T04238
Symbol
gatB
Name
(GenBank) Asp-tRNAAsn/Glu-tRNAGln amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00970
Aminoacyl-tRNA biosynthesis
hrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hrubri_4609 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hrb03029
]
Hrubri_4609 (gatB)
Enzymes [BR:
hrb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
Hrubri_4609 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
Hrubri_4609 (gatB)
Mitochondrial biogenesis [BR:
hrb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Hrubri_4609 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ALU91754
UniProt:
A0A0U3LT90
LinkDB
All DBs
Position
complement(5421874..5423334)
Genome browser
AA seq
486 aa
AA seq
DB search
MQWEVVIGLETHTQLSTQSKIFSGSSTRFGAEPNTQASPVDLALPGVLPVLNKGAVERAI
QFGLAIGATIAPRSIFARKNYFYPDLPKGYQISQFEIPVVQGGTMSFAVEKEGKTEIKTI
NLTRAHLEEDAGKSLHEDYQGMTGIDLNRAGTPLLEIVTEPEMRSAAEAVGYAKALHSLV
MWLGICDGNMQEGSFRCDANVSVRPVGQEKFGTRCEIKNLNSFRFLEEAINYEVRRQIEL
IEDGGTVVQETRLYDPDKKETRSMRSKEDAQDYRYFPDPDLPPLAISQEWIERVKATMPE
LPAAMRERFVADYALPEYDAMVLTQSKGMASYFEAVVAAAGKEQAKPAANWLMGDVASTL
NREDTDIADAPVKAAQLALLLKRIADGTISNKIAKEVFASMWEAKSDKDSLADDIIEAKG
LKQISDSGALEAIVDQVLAANEKSVAEFRAGKEQAINALIGQAMKATRGKANPAQLTELL
RKKLAG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggaagtcgtcatcggcctcgaaacgcacacgcagctttcgacccaatccaag
attttcagcggcagctcgacccgcttcggcgccgaacccaacacccaggccagcccggtg
gacctggccttgccgggcgtgttgccggtcttgaacaagggcgcagtggaacgtgcgatc
cagtttggtctggccatcggcgccaccatcgcgccgcgctccatcttcgcgcgcaagaat
tacttctatcctgacctgcccaagggctaccagatcagccagttcgagatccccgtggtg
caaggcggcaccatgtccttcgcggtagagaaggaaggcaagaccgagatcaagaccatc
aacctgacccgcgcccacctcgaagaagacgccggcaagtccctgcacgaggattaccag
ggcatgaccggcatcgacctcaaccgtgccggcacgccgctcttggaaatcgtcaccgaa
cccgagatgcgcagcgccgccgaagccgtgggctatgccaaggccctgcattcgctggtg
atgtggctgggcatctgcgatggcaacatgcaggaaggctccttccgctgcgacgccaac
gtctccgtgcgtccggtcggccaggaaaaattcggcacccgctgcgagattaagaacctg
aactccttccgcttcctggaagaagccatcaactacgaagtgcggcgccagatcgagctg
attgaagacggcggcaccgtggtgcaggaaacccgcctctacgacccggacaagaaggaa
acccgctccatgcgcagcaaggaagacgcgcaggattaccgttacttccccgaccccgac
ctgccgccgctggccatctcgcaggaatggatcgaacgcgtcaaggccaccatgcccgag
ctgcctgccgccatgcgcgaacgtttcgtggccgactatgcgctgccggaatacgatgcc
atggtgctgacccaatccaagggcatggcctcctacttcgaagccgtggtggctgcagcc
ggcaaggaacaagccaagccggccgccaactggttgatgggtgacgtcgcctccacgctc
aatcgcgaagacaccgacatcgccgatgcccccgtgaaggctgcacaattggcgctgctg
ttgaagcgcatcgccgatggcaccatctccaacaagatcgccaaggaagtctttgcgagc
atgtgggaagccaagtccgacaaggactcgctggccgacgacatcatcgaagccaagggc
ctgaagcagatctccgatagtggcgcgctggaagccatcgtggaccaagtgctggcggcc
aatgaaaaatcggtggcggaattccgcgccggcaaggaacaggccatcaacgccctgatc
ggccaggccatgaaggccacgcgcggcaaggccaatccggcgcaattgactgaactgctg
cgcaagaagctggcgggctga
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