Haliotis rubra (blacklip abalone): 124265541
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Entry
124265541 CDS
T07967
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124265541
03036 Chromosome and associated proteins [BR:
hrj03036
]
124265541
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124265541
Chromosome and associated proteins [BR:
hrj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124265541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_N
S1
Spt6_S1
HHH_9
SH2
Tex_YqgF
HHH_3
Motif
Other DBs
NCBI-GeneID:
124265541
NCBI-ProteinID:
XP_046556281
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MSGFLEHEAEVSDGGSSSADDSESEIKVVKKKKEKKKSRARISDDEEDDEDMDDERLIAE
EMKDFINEDVEEEGEEESGEEGDGETGKRKHDSDDQLDDQLSDDDYDLIEENLGIKVKRK
QKLKRIRVMSDEDSDREGGGEEDGKHMIEDELFEGRGDDDGDDMDDRRSVVARETEETNE
FGNLDEEEEEESDVDDFIVDEEGKPISKGKKKKHIIHSDSALQAAQDIFGVDYDFEEFAQ
YGEEEDEEDIEEEVYEEEDEVEGEDGETRIRVKKTRKKASKKSIFEVFEPSELERGHFTD
MDNQIRTTDMPERFQLRQIPVRQTEEGELEEEAEWIYKQAFTTRCTSTQPYLDQEQSSHL
GGTNRRGPNMINKIRDAINFMRNQRLEVPFIAFYRKEYVEPELNINDLWKVWHYDEKWSQ
LVTRKKNLMRLFEKMQNYQFEENSDPDKLLESSVRPLTDEDIDRVKSVQTMEELRDVYQH
FSLYYGHDIVKMRNAEKRKQSQENAAERGEQDPEEAPPEIIKQASRKSGYSICQDAKLGD
LASHFGLTPEQFGENLRDNYQRHEVDQCPIEPSEMAKDYVCSQFATEEDVLMGARHMVAM
QIAHDPLVRQSVRQTYSERAKLIVVPTKKGMKEIDEGHSCYTLKYVRNKPVKDLRDEQFL
RLTQAEEEGLLTLSISIDEEGSSVSTYFEEVRQLYYKDEFSHLVQQWNIQRSEALKRALT
KILYPQMEKELRTKLLAESKDGIVKACSRKLYNWLKVAPYQVDQQLEDDYDYDDNHGVKV
LGVAFSTDRDSTAFGALIDGDGEVTDFIRLEHILKRRNAWRQMDRDAKESEMEKLKDFIS
TKKPHVVAVTAEARDALRVIEDIKQLIGDLEQEEQMAPISVELMDNELAMVYEASNKSQA
EFREYPPVLRHAVSVARRLQDPLVEFAQLCNADEDILCLKYHPLQDSVSKEDLLNSMYLE
FVNRVNEVGVDVNEAITHSHTSSLVQFICGLGPRKGSNLLKVLKQNNQRLENRTQLVSLC
NMGPKVFINCAGFIKIDTNSLGDSTDNYVDVLDASRVHPEAYEWARKMAVDALEYDDTAE
DANPAGALEEILESPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELNQSYKDLRTPY
RSPTNEERFNMITKETPETFYVGKLVMCTVTGIAHKRPQGDQLDQANPVRNDESGLWQCP
FCQKDDFPELSEVWSHFDAGNCPGAAVGVKTRMDNSVTGFIPTKMISDKQVKNPEERVQV
GMTIHARIIKIDIDRFQVDMTCKSSDLHDKEGTWKPQRDVYYDCDVEKRDIEKEQEKKKQ
QARQTYIKRVIVHPSFHNIGYKECEKLMTNMDQGDVIIRPSSKGANHLTCTWKVADDIMQ
HIDIREEGKENDFSLGRSLWIAQEEFEDLDEIIARHIQPMAAYVRDIVGFKYYRDAEGGK
REILDKLLIEEKKKAPSRIPYFFSVSKQYPGKFLLSYLPRTKPRHEYFSVTAEGLKYRTQ
IFHSINSLIRWFKEHFRDPIPGTPASSRTPMVSSAYPTPSINLQNVDPATIQRAAAVLPN
NIYNTLAQVANATPQQFGSNRNFAGAYSGGFGYQQPTPLGMTPLVTPSYHGQIATTPGGQ
PITTPSYNPTPRSAWPPTTPRTPARTPQHRTTPASPRHSMTPTLHLPSTPAATDWAKAAE
MWAKRKQETRKPTTPRSHSSPRVRPSPSPMLDSSPDGGDATPLIDER
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttcctggaacatgaagctgaagtatctgatggaggatcatcctcagcagat
gactccgaatcagaaatcaaagttgtcaaaaagaagaaagagaaaaagaaatcaagagct
agaatatctgatgatgaagaagacgatgaagatatggatgatgagcgattgattgctgaa
gagatgaaggacttcataaatgaagatgtagaagaagaaggggaagaggaaagtggggaa
gaaggtgatggagagacaggcaaacgtaaacatgattctgatgaccagcttgatgaccaa
ctttcggatgatgactatgatttgattgaagagaatcttggcatcaaagtcaagagaaag
caaaagttgaagcgtatccgtgtgatgtctgatgaagacagtgacagggaaggaggtggc
gaggaggatggaaagcacatgatagaggatgaactgtttgaagggcgtggggatgatgat
ggtgatgacatggatgacaggcgctcagtggttgcacgtgaaactgaagaaacaaatgaa
tttggcaatctggatgaagaagaagaagaagaatcagatgttgatgacttcattgttgat
gaggagggaaaacctataagtaaaggaaagaagaagaaacacattattcacagtgactcg
gcattgcaggcagcccaggatatatttggtgttgattatgactttgaggagtttgctcag
tatggagaggaagaggatgaggaagatatagaagaagaagtgtatgaggaggaggatgag
gtcgagggtgaagatggggagacaaggattcgggtcaagaaaactcgcaagaaggccagc
aagaagagcatatttgaagtatttgagccaagtgaactggagcgaggccacttcacagat
atggacaaccagattcgaactacagacatgccggagaggttccagttgcggcagatccct
gtccgtcagactgaggagggagagttagaggaggaagcagagtggatctacaagcaggcc
ttcaccaccaggtgtacctccactcagccatacctagaccaggaacagagcagccatctt
ggagggactaaccgtcgggggcccaacatgatcaacaagatcagagatgccatcaatttt
atgaggaaccagaggcttgaggttccattcattgctttctatcgcaaagagtatgttgag
cctgagctgaacataaacgatctgtggaaagtgtggcactatgatgagaagtggtcacag
ttagtcaccaggaaaaagaacctgatgcgtctatttgagaaaatgcagaactatcagttc
gaagaaaactctgatcctgataaactccttgagtccagtgtgcggcccttgacagatgag
gacattgacagagtgaagagtgtccagacaatggaggagctgagagatgtttaccaacac
ttcagtctctactatgggcatgacatagtcaaaatgcgtaatgcagagaagcgtaagcag
agtcaggagaatgctgcagagcgaggggaacaggaccctgaggaagcacccccagaaatc
atcaaacaagcaagtcgcaagagtggctactccatatgccaagatgcaaagctcggtgac
ctggccagtcactttggcctgactccggaacagtttggagagaatttacgagacaattat
cagcgtcatgaagttgaccaatgtccaatagaaccttcagagatggccaaggattacgtt
tgtagtcaatttgccacagaggaagatgtactgatgggtgctcgccacatggttgccatg
cagattgcacatgatcccctggtgagacagagtgtgcgacagacgtacagtgagagagcc
aagctaattgttgtgccaacaaagaagggaatgaaggaaattgatgaaggacacagttgc
tacaccctgaaatacgttcgcaataagccagtgaaggacctccgagatgaacagttccta
cgtcttactcaggcagaagaagaagggctgctgacattgtctatttccattgatgaggaa
ggcagcagtgtcagtacatactttgaagaagtccgccaactgtattacaaggatgagttc
agccacttggttcagcagtggaacattcagaggagtgaagccctgaaacgtgccctcacc
aagatcctgtacccacagatggagaaggagctgaggaccaagcttctggccgagtccaag
gatggtattgtcaaggcctgtagtcgtaagctgtacaactggctgaaggtggctccctac
caggtggaccagcagctggaggacgactacgattatgatgacaaccatggggtcaaggtt
ctgggagtggcattcagcactgacagagacagtacagcatttggtgcactgattgatgga
gatggtgaggtgaccgacttcatcagactggagcacatactgaaacgtcgcaatgcctgg
aggcagatggacagagatgccaaggagagtgaaatggaaaagctgaaagacttcatttct
accaagaaaccccatgttgtagctgtcactgcagaggccagggatgctttgcgagtgatt
gaggacatcaagcagttgattggtgacctggaacaagaggagcagatggcccctatcagt
gtggagctcatggacaacgagttagccatggtgtatgaggccagcaacaagtcacaggct
gagttccgcgagtacccccctgtactcaggcatgcagtgtcagtagcacgccgactgcag
gatccccttgtggagttcgcacagctctgtaatgcagacgaggacatcctctgtttgaag
tatcacccacttcaggattctgtatcaaaggaagatcttctgaattcaatgtacctggaa
tttgtcaaccgagtgaatgaagtgggtgtggatgtgaatgaggcaatcactcactcgcac
acgtcatctttagtacagttcatctgtggacttggtccaaggaagggcagtaatctcctg
aaggtcctgaagcagaacaaccagaggctggagaaccgcacacagcttgtgtctctgtgc
aacatgggaccaaaggtctttatcaactgtgctggcttcattaagatcgataccaacagc
cttggagacagtactgacaactatgtggatgtcctggatgcatctcgagttcatccggag
gcgtacgagtgggcccggaagatggcagtggatgctctggagtatgacgacactgcagag
gatgccaacccagctggtgccctagaggagatccttgagagccctgagaggctaaaggac
ctggatctggatgcttttgctgaggagctggagagacagggttatggtgacaaacacatt
acactgtatgacatccgggcggaactgaaccagagctacaaggacctgcgaactccatac
agatcacccacaaatgaagaaagattcaacatgatcacaaaagaaacaccagaaaccttc
tatgtcggtaaactggtgatgtgcacagtgacggggattgcccacaagcgtccacaaggt
gaccagctggaccaggctaacccagtccggaatgatgagtccggactctggcagtgtcca
ttctgtcagaaggatgacttcccagaactgagcgaggtgtggagtcactttgatgcgggg
aactgtcctggggcagcagttggagtgaaaactcgcatggataactccgtcacaggcttc
atcccgaccaagatgatcagtgacaagcaagtgaagaacccagaggagagagtacaggtt
gggatgacaatacatgctcgcatcattaagatagatatcgacagattccaggtggatatg
acctgcaaatcatcagatcttcatgacaaggaaggcacttggaaacctcagcgtgatgtt
tactatgactgcgatgtggagaagagggacatcgagaaggagcaggagaagaagaaacag
caggccagacagacctacataaagcgtgtgatagttcacccatctttccacaatatcggg
tacaaggagtgtgagaaactgatgactaacatggaccaaggggacgtcattatcaggccc
agcagcaagggagccaaccacttgacgtgcacatggaaggttgctgatgacatcatgcaa
cacatagacattcgtgaggagggcaaggagaacgacttcagtttggggcgctctctttgg
atagcacaggaggaatttgaggacctggatgaaatcattgccagacatattcagcccatg
gcagcatatgtgcgggatattgtgggcttcaagtactaccgtgatgctgaaggtggcaag
agagagatccttgacaagttgctgattgaagagaagaaaaaggctccatccagaatcccg
tacttcttcagcgtgtccaagcagtaccctggtaagttcctgctgtcctaccttcccagg
accaaaccccgccatgagtacttctcagtgacagcagagggcctcaagtaccgcacacaa
atcttccattccatcaactcattaatccgctggttcaaggaacacttccgagaccctatt
ccaggcacccctgccagttcccgcaccccaatggtatcttcagcgtaccccacccccagc
atcaaccttcagaatgtggatcccgccactatccagcgtgcagcagccgtcctccccaac
aacatctacaacacgctggcacaggtagccaatgctacaccgcaacagtttgggtcaaac
cgcaactttgcaggtgcatatagtggtggctttggataccagcaacccacacccctgggt
atgactccacttgtgaccccctcctaccatggtcagatagccactaccccaggagggcag
cccatcaccacaccttcctacaaccctacaccacgctctgcctggccacccactacacca
aggactcctgcccgtacaccccaacataggaccacacccgccagcccgcgacacagcatg
accccgaccctgcacctaccctccacccctgctgccactgattgggccaaggcagctgag
atgtgggccaagaggaagcaggagacccgcaagccgaccacacctcgctctcatagttct
cctcgtgtgcggccatcacctagtcccatgctggacagcagtccagatggcggagacgcc
acacccctcatcgatgagcgctga
DBGET
integrated database retrieval system
