Haliotis rubra (blacklip abalone): 124268485
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Entry
124268485 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like isoform X1
KO
K12021
tripartite motif-containing protein 45
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124268485
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124268485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-RING_5
DUF6471
Motif
Other DBs
NCBI-GeneID:
124268485
NCBI-ProteinID:
XP_046559420
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MDGAAQDDAVPPSPTWCDMNLELALLREGKMEEHCGVVPRGFLCCRLCEEEFRQPKFLPC
LHSFCKDCLQAHVKKYADEDGYFGCPICGTETTLRQQKVEKLPDNLFARRLSNPAISLQK
PPKRDKSRSCRDCGQKSEISFHCINCDDFLCQMCSESHQQQEETASHSTQTIQDYEAQNK
PRSRPASPDTPSVLSQCCEYYDAYDIGAMFCVDCDMALCAECHTKSHQEHRCAELTAVSQ
NFEIKIKPPLDQLTNDAKSLKKTLKDLEIAEKVVEKQQIRLQADVKNRTKVLCDLIMEYE
NVLLSEVDKSQSHNRECIQQKRNDIELHLASIQAVTDLTEKLVSFGSEEEKVSLRKKIGR
RVRELCETELPTQAVNLVSLNLCEPDVNVEKICDLFGELKTGMASCSRRSSRSHISTTQE
SGHPSVSDSIESHDNDTEITELEDYEERDHDMLSASNTSETFRAIQEEPEEQEQEQSNSS
FQSSTQDEVPSLTLDTPAKELALPSNIQRDCIKGMGVNQSGDIIIGAASAGSQCVYYVEK
RGIIRGQIPVEKGWNIHSVAPDGKVAVAVTRGDNRYKVKVLSNDGCGTVLANLHLESFGL
NYVAPYSHGQVIISSSRYAQLNRNYGKSAKSGGNVAVYNKDGQITLHITNEDFVDEGLYL
FEKPQHIAADADENFFVCDPSTHIVSGFNKDGVLLFEYGNTDSDEEIYQGPDLVCVDRKK
NVLVTDKREGRIDLLTYEGQLQKCLFLEDVVKFVSVSSDNKLVIGTTEGTIKFYEYL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcagcacaggacgatgctgttccaccttcaccgacatggtgtgatatgaac
cttgaactggctctcctcagagaaggcaagatggaggagcactgtggggtggtgccacga
ggcttcctctgctgccgtctgtgtgaggaggagtttcgtcagcccaaattcctcccctgc
ctgcactccttctgcaaggactgtttgcaggcacatgtcaaaaagtatgccgacgaggat
ggatacttcggttgtccgatttgtggcaccgagacaaccctcaggcagcaaaaagtggag
aaactgccagacaatcttttcgccagacggctgtcaaatcctgccatctccttgcaaaag
ccgccaaagagggacaaatcccgcagctgtcgcgactgtggacagaagtcagaaatatcc
tttcactgcataaactgtgatgacttcctatgtcagatgtgttccgagtcccatcagcag
caagaggaaacggccagtcacagcactcaaaccattcaggactatgaagctcagaacaag
ccccggtcacgcccagcctctccggacactccgtcggtgttgtcccagtgctgcgagtac
tacgatgcctatgacattggtgcaatgttctgtgtggactgtgacatggccctgtgtgcc
gagtgccacaccaagagtcatcaggaacataggtgtgcggagttgacagcagtgtctcag
aactttgagataaagatcaaacctcccctcgaccaactcaccaatgatgcgaagtccttg
aagaaaactttaaaggatctggagattgcggagaaggttgtcgagaaacagcagattcgc
cttcaggcagatgtcaagaacagaaccaaggtactctgtgacctcatcatggagtacgag
aatgttcttctcagtgaggtagacaagagccagtctcacaatcgtgagtgcatccaacaa
aaacgcaatgacattgagctgcatcttgcctctattcaagctgttaccgaccttacagag
aaacttgtgtcatttggttcagaggaagaaaaggtgtccctgagaaagaaaataggtcgg
agggtcagagaactttgtgagactgaactcccaacacaagccgtgaacctggtcagtctc
aacctgtgcgaacctgacgtcaatgttgagaagatctgtgacttgtttggagagttgaaa
actggcatggcgagttgttcccgtaggtcaagccgatctcacatttccacgacccaagaa
tcaggtcatccaagcgtcagtgactcaatagaaagccatgacaatgacacagaaattact
gaactggaagactatgaggaacgtgaccatgacatgcttagtgccagtaacaccagcgag
actttcagggcaatacaggaagaaccagaggaacaagaacaggaacagtccaactcctcc
ttccagtcctcaacacaagatgaggtgccctctctaactctggacactcctgccaaagag
cttgctctaccctccaacatccagcgagactgcattaaaggaatgggagtcaaccagagt
ggagacatcatcatcggtgcggcatctgcaggaagtcaatgtgtttactatgtggaaaaa
cgtggcatcatccggggccaaatcccagttgaaaagggctggaatattcactctgttgct
ccagatggaaaggtggcggtcgcggtcacacggggagacaatcgttacaaagtcaaggtt
ttgtcgaatgatggctgtggcacagtccttgctaatcttcatcttgaaagttttgggttg
aattatgttgctccgtactcacatggtcaagtgataatttcttcaagcaggtacgcacag
cttaaccggaactacggcaagtccgccaagtcaggtggaaatgtggcagtgtacaacaag
gatggccaaatcacgctacacatcacaaatgaggactttgttgatgaagggctgtatctt
tttgaaaagccgcagcatattgctgccgacgctgatgaaaacttttttgtgtgtgatccg
tccactcatatcgtgtcgggtttcaataaggatggcgttttgttgtttgagtacggcaac
acagacagtgatgaggaaatctaccagggtcctgacctggtgtgtgtcgacagaaaaaag
aatgttcttgtcacggacaagcgtgaaggtcgaattgacctcctcacctatgaaggccag
ttacaaaagtgtctcttcctggaggacgttgtcaagtttgtgtccgtcagctctgataac
aagcttgttataggcactactgagggcacaatcaagttctatgaatatctgtga
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