Haliotis rubra (blacklip abalone): 124278812
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Entry
124278812 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124278812
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124278812
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124278812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
FYVE
Exonuc_VII_L
UPF0128
Motif
Other DBs
NCBI-GeneID:
124278812
NCBI-ProteinID:
XP_046570539
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MDCAGAESLISYDIRQAFLYESMSKAVENHNMAESIREEVLSCHICLEVLTEARTLPCLH
TYCKACLMKMVEIKNKKVRIIRCPECREEVRLYKAGVEDLRCSFFINSLMEIYNTKRQVL
KCTVCKQRRENRTAVSKCTTCGDGLCDTCSKGHQLSTTTVHHKVLPLGEFASGDYDQHLR
EAQTFPCVSHQKELEYYCETCEKVACLSCLLVDHKDHTYSTIPQAYTSKKELLETMFCQV
ESKVTQIEETKNXVEHMYDEADKQSREVIRTIMETGKAVLRAAEREITLTKQTSKTLIES
RLATLTKVKENLEKQIKQEKSSVEFCRRVLSNGKPVEVLEIGDMLRKRLDQLSLVENQVD
IQELDSNTRIEDTVVNYKFQGDFSLGIFKPEIEKSVQEVETQTDFTQAEIRTNEVSTQYT
SEDFDDQESQEAGVEGERDSPAVGPPGGEQAVTGDGNILHTPVDNNLSPDRSAGAAGNTW
ACGAGRGSEDGSAPVALTANGLVDTSYDCRGPGQRDASVFDFLSHALFIYIFCTMFLWDH
FSGYVLGKLS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgctggtgcagaaagcttgatatcatacgacatacgccaggctttcttatat
gagagcatgtcgaaggcagtagagaatcacaacatggcggagtctattcgggaagaggtt
ctgtcctgccacatctgtctggaggttctcacggaggccaggacgctgccgtgtctccac
acctactgcaaggcctgtctcatgaaaatggtggagatcaaaaacaagaaggtccgcatt
atcaggtgcccggaatgcagggaggaggtgagactgtacaaggcaggcgtggaggacctg
cggtgcagcttcttcatcaacagtttgatggagatttataacaccaagaggcaggtgttg
aagtgcaccgtgtgcaagcaaaggcgtgaaaacaggacagcagtgagtaaatgcactacc
tgtggcgacggcctgtgtgacacttgcagtaaaggacatcaactatccacaactaccgtc
caccacaaggttctccctctgggagagttcgcatctggagactacgatcagcatcttcgg
gaggcccagaccttcccctgcgtgtcccaccagaaggagctggagtattactgcgagacg
tgcgagaaggtggcctgcttgtcttgcctactagtggatcacaaggaccatacgtactcc
acaattccacaagcgtacaccagcaagaaggagcttcttgagaccatgttctgtcaagtc
gagtctaaagtgacccagattgaagaaactaaaaacnacgttgagcacatgtatgatgaa
gccgataaacaaagccgcgaggtcatcagaacaataatggagacaggcaaggctgtgctt
cgagctgcagaaagagagattacactgactaaacaaacgtccaaaacactgatcgaatct
cgacttgccacattaaccaaagttaaagagaacctggagaagcaaataaaacaggaaaaa
tcttctgtagaattctgtcgccgcgttctgtcgaacggcaagcctgtggaagtattggag
atcggggatatgttgaggaagaggctggatcagctgagtctggtagagaaccaggtggac
atacaagagctggactccaacacacgtatcgaggacactgttgtgaactacaagttccaa
ggggacttctcgctgggtatcttcaagccagaaatagaaaaatcagtccaagaagtagaa
acacaaactgatttcacacaggcagaaattcgaaccaatgaagtatcaactcagtacact
tcagaagacttcgatgaccaggagtcacaagaggctggtgttgagggagagagggattct
ccagctgtaggtcccccaggtggggagcaggcggtcaccggtgatggaaacatcctccac
acacctgttgacaacaatctgtccccagacaggtcagcaggcgctgcaggaaacacctgg
gcttgtggggctggacgggggtctgaagatggttcagcacctgtagctttgacggcaaat
ggtcttgtggatacaagctatgactgccggggaccagggcagagggatgcttctgtcttt
gatttcttgtcccatgcactgtttatctacattttctgtacgatgttcctgtgggatcat
ttcagtggttatgttttggggaaactatcgtga
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