Haliotis rubra (blacklip abalone): 124279579
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Entry
124279579 CDS
T07967
Name
(RefSeq) uncharacterized protein LOC124279579
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124279579
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124279579
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124279579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-B_box
Motif
Other DBs
NCBI-GeneID:
124279579
NCBI-ProteinID:
XP_046571376
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MDPQISEKADIDSYLFVGLKPFMCVIYTETSFTSTKGNTRPAERTLTEKGEFNRMRQTTR
THSHRKAYQHCVRVYSQTTKADKRPADRTVTEKGEFSRLPLTTREHTDTGKMATAGLEKK
VKDNFLTCSICFEMYTDPCTLRCDHTFCRKCVTSYIQTRPDAVQSKTIPCPNCRQDTKVP
NPSSPVEEWAGQIKPSITIQGLIDTYRSEVAVPGTSSTCCTICQQLGETTPGVLWCPECE
VVLCDKCVKTHRVTPISLNHDLCDLSCRSKVKRRIKCTEHKSNRVEFHCQDCGKAACQTC
CIIYHRACKAVVTIESMKPRMKAALMEKKLGMEKRLKVRSKKVDIRNEKLLSSSRITKSA
VQNIRLICQTAINKIKQKETQLLEELNNILRTYADQLRADVKLEEIEMQMYRQHCEFIYQ
ALVSDCEMDLYDAYQVWESGAVEMEDVRGTEAADTRRIDDVIFTPDTDNVLKALDNLQLG
KIDVTYRDQERCVPSLVLVDTMDRRMADDDKMATAGLEKKVKDNFLTCSICFEMYTDPCT
LRCDHTFCRKCVTSYIQTRPDAVQSKTIPCPCCRQDTKVPHPSRPVEEWAGQIKASIVIQ
GLIDTYRSEVAVQETSSTCCTICQQLGETTLGVLWCPECEVALCDKCVKTHRVTPNSLNH
DLCDLWSRSNVKRRIKCTEHKSNLVQFHCQDCGKAACQTCCIIYHRACKTVVTIESMKPG
MKAALMEKRLGMEKRLKVRSKKVDIKQEKLQSNSRITESAVQNIRLICQTAINKIKQKET
QLLDELNNTSQTYADQLQADVKLEEIEMQMYRQHCEFIDQALVSDCEIDLYDAYQAWESG
AVEMEDVRGTEAADIRRIDDVIFTPDTDNVLKVLDNLQLGKIDVPYQDQEQYLPSPVLGD
TIDGRMEGDEKDPFLFDVTVLVVDGVQTCVVTDDNNKCVKSFFTRNNHSCHSKLPLGNAP
RGITQLNEKQVMVAVPYSHQIVIIEVTPDLVLLSTTKTPAGYFSLAVLNPSSLAAGTWEC
VDILDMAGHVLRSVTTYNDDSLFSCPFNMCVNNKGNLLVSDCMNTSVTCLTSGGDVLWRY
APTGDKALSYPCGITTTSTGDILVVDWDADKVIQLTESGEFVRELLTLEDGDQAGMCDIF
CDKYGFLFLCTDTEVKGARLSDIKIKRMKVSAELRFMTFCAWC
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggacccacaaatcagcgaaaaggccgacatagactcttacctgtttgtcgggctaaag
ccctttatgtgtgtcatatacacagaaacgtccttcacgtcaacaaagggcaatacgcgc
ccagccgagagaacacttacggaaaagggcgagttcaaccgaatgcgacaaaccacacga
acacacagccaccggaaagcctaccaacactgtgtgcgtgtctacagtcagacaacaaag
gccgataagcgcccagcggacagaacagttacggaaaagggcgagttcagccgattgcca
ctaaccacgcgcgaacacacagacaccggaaagatggcgaccgccggtctagagaagaaa
gtaaaggataatttccttacgtgctccatctgcttcgagatgtacacagacccgtgcaca
ctgaggtgtgatcacacattctgcaggaaatgtgtcacctcatacatccaaaccagacct
gatgctgtacagtccaagaccatcccctgtcccaactgtcgacaagacaccaaggtcccc
aaccccagcagtccggtggaggagtgggcggggcagatcaaacccagcatcactatacag
gggctgattgacacctatagatctgaggtggctgtgccaggaacttcaagcacctgttgt
acgatctgtcagcaactaggggagacaactccaggggtcttgtggtgtcctgagtgtgaa
gtggtcctctgcgacaaatgtgtgaagacacaccgggtgacccctatttcactgaaccat
gacctgtgtgacctgtcgtgtaggtcaaaggtgaaacggaggatcaagtgtacggaacac
aagagtaaccgtgttgagttccactgtcaagactgtgggaaggctgcctgtcagacatgt
tgtatcatctaccacagagcttgtaaggctgtcgtcaccattgagtctatgaagccaagg
atgaaggcagcactgatggagaagaaacttggcatggagaagagactgaaagtgaggtcg
aagaaagtagacatacgaaacgagaagctcctaagtagttctagaatcacgaagtcagct
gttcaaaatataagattgatctgccagacagccattaacaagattaaacagaaagaaaca
caactcttggaagaactgaataacatattacggacatacgccgaccaactccgagctgat
gtgaaactggaagagatcgagatgcagatgtacagacaacattgtgagtttatttaccag
gccttggtatcggactgtgagatggacctatatgacgcgtatcaggtctgggagtctgga
gctgtagagatggaggatgtcagaggtacagaggcagcagacacccggagaatagatgac
gtcatctttacaccagacactgacaatgtccttaaggccctagataacctacagttgggg
aagattgacgtcacatacagggatcaggagcgatgtgtgccatctctagtgctggttgac
acgatggataggaggatggcggatgatgataagatggcgaccgccgggctggagaaaaaa
gtaaaagataatttcctgacttgctccatctgcttcgagatgtacacagacccatgtaca
ctgaggtgtgatcacacattctgcaggaaatgtgtcacctcatacatccaaaccagacct
gatgctgtacagtccaagaccatcccctgtccctgctgtcgacaagacaccaaggtcccc
caccccagcaggccggtggaggagtgggcggggcagatcaaagccagcattgtgatacag
gggctgattgacacctataggtccgaagtagctgtgcaagagacctcgagcacctgttgt
acgatctgtcagcaactaggggagacaactctaggggtcttgtggtgtcctgagtgtgaa
gtggccctctgtgacaaatgtgtgaagacacaccgggtgacacccaattcactaaaccat
gacctgtgtgatctgtggtctaggtcaaatgtcaaacggaggatcaagtgcacggaacac
aagagtaaccttgttcagttccactgtcaagactgtgggaaggctgcctgtcagacatgt
tgtatcatctaccatagagcttgtaagactgtcgtcaccattgagtctatgaagccaggg
atgaaggcagcactgatggagaagagacttggcatggagaagagactgaaagtgaggtcg
aagaaagtagacataaaacaggagaaactccaaagtaattctagaatcacagagtcagct
gttcaaaatattagattgatctgccagacagctattaacaagattaaacagaaagaaaca
caactcttggatgaactgaataacacatcacagacatacgccgaccaactccaagctgat
gtgaagctggaagagatcgagatgcagatgtacagacaacattgtgagtttattgaccag
gccttggtatcggactgtgagattgacctgtatgacgcgtatcaggcctgggagtctgga
gctgtagagatggaggatgtcagaggtacagaggcagcagacatccggagaatagatgac
gtcatctttacaccagacactgacaacgtcctgaaggtcctcgataacctgcagttgggg
aagattgacgtcccataccaggatcaggagcaatatctgccatctccagtgctgggtgac
acgatagatgggaggatggagggtgatgagaaggacccttttctatttgatgtgacagtc
ctggttgtagatggtgtacagacatgtgttgttacggacgataataacaagtgcgtgaaa
tctttcttcacaagaaataatcattcatgccatagtaaacttccccttggcaacgcccca
cgtgggataacacagttgaatgagaagcaagtgatggttgctgtcccatactcccatcag
attgtaataatagaagtgacccctgacctggtgctgctctctaccaccaaaacacctgct
ggatacttcagtctggctgttctgaatccttcatctctagcagcaggtacttgggaatgt
gttgatatcctggacatggctggacacgtgttgaggtcagtcactacatacaatgatgac
tcgctgttttcctgtcccttcaacatgtgtgtcaacaacaagggcaacctacttgtgtct
gactgtatgaatacttctgtgacatgtctgacgtcagggggggatgttttatggagatac
gcccccaccggagacaaggcactcagctacccttgtggtatcacaactaccagcacagga
gacatcctggttgtagactgggacgcagacaaggtgatacagctgacagagtcgggagag
tttgtcagggagctgctcacgttagaagatggcgatcaggcaggcatgtgcgatatattc
tgtgataaatacggtttcttatttctatgcacagacacggaagtaaagggtgcgcgtttg
tctgacataaaaatcaaaagaatgaaagtcagtgcagagctgcggtttatgacattctgt
gcatggtgttag
DBGET
integrated database retrieval system
