Haliotis rubra (blacklip abalone): 124279580
Help
Entry
124279580 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124279580
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124279580
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124279580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124279580
NCBI-ProteinID:
XP_046571377
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MSDKCCYRERSVLDKTTINSEFAPLKILQICELQNQMATAGLEKKVKDDFLTCSICLEMY
TDPCTLRCDHTFCRKCVTSYIQTRPDAVQSKTIPCPCCRQNTKVPNPRRPIEEWAGQIKA
SILIQGLIDTYRSAEDVQETSSTCCTICQQLGETTPGALRCPECVVALCIKCVKIHRVTP
NSLNHDLCDLSSRSKVKRRIKCTKHRINRVEFHCQNCGKAACQTCCIIYHRACKAVVTIE
SMKPGMKAALMGKRLGMEKRLKVRSKKVDIRNEKLQSSSRITESAVQNIRLICQAAINKI
KQKETQSLDELNNISQTYADQIRADVNLEEIEMQMYRQHCEFIDQALVSDCEMDLYEAYQ
AWESGAVEMEDVRCTEAADIRRIDDVIFTPDTDNVMKVLDNLQLGED
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagtgctgctaccgcgaacgttcagtgcttgataaaacaactatcaacagt
gaatttgcccccttaaagatacttcagatctgtgaacttcagaatcagatggctacagcc
gggctagagaagaaagtaaaggatgatttcctgacgtgctccatctgcttggagatgtac
acagacccgtgtacactgaggtgtgatcacacattctgcaggaaatgtgtcacctcttac
atccagaccagaccagatgctgtacagtccaagaccatcccctgtccctgctgtcgacaa
aataccaaggtccccaaccccaggaggccgatagaggagtgggcggggcagatcaaagcc
agcattttgatacaggggctgattgacacctataggtctgcggaagatgtgcaagagacc
tcgagcacctgttgtacgatctgtcagcaactaggggagacaactccaggggccttgcgg
tgtcctgagtgtgtagtggccctctgtatcaaatgtgtgaagatacaccgggtgacaccc
aattcactaaaccatgacctgtgtgatctgtcgtctaggtcaaaggtcaaacggaggatc
aagtgtacgaaacacaggattaaccgtgttgagttccactgtcaaaactgtgggaaggct
gcctgtcagacatgttgtatcatctaccacagagcttgtaaggctgtcgtcaccattgag
tctatgaagccagggatgaaggcagcactgatggggaagagacttggcatggagaaaaga
ctgaaagtgaggtcgaagaaagtagacatacgaaacgagaagctccaaagtagttctaga
atcacagagtcagctgttcaaaatatcaggttgatctgccaggcagccattaacaagatt
aaacagaaagaaacacaatccttggatgaactgaataacatatcacagacatacgccgac
caaatccgagctgatgtgaatctggaagagatcgagatgcagatgtacagacaacattgt
gagttcattgaccaggccttggtatcggactgtgagatggacctgtatgaagcgtatcag
gcctgggagtctggagctgtagagatggaggatgtcagatgtacagaggcagcagacatc
cggagaatagatgacgtcatctttacaccagacactgacaacgtaatgaaggtcctggat
aacctgcagttgggggaagattga
DBGET
integrated database retrieval system
